Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4626

Experiment: Ying_sugar7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 1
1,575,036	+				-0.0
1,575,065	-				-0.9
1,575,065	-				+0.8
1,575,065	-				-0.3
1,575,098	-				+0.5
1,575,162	+				-0.7
1,575,163	-				+0.5
1,575,163	-				+0.7
1,575,163	-				+0.1
1,575,163	-				+0.4
1,575,284	+				-0.4
1,575,285	-				+1.3
1,575,349	-				+0.2
1,575,382	-				+0.1
1,575,495	+				-0.0
1,575,504	+				-0.6
1,575,513	+				-0.8
1,575,513	+				-0.1
1,575,514	-				-0.1
1,575,514	-				+0.8
1,575,661	-				-0.1
1,575,674	-				-0.5
1,575,694	+				-0.2
1,575,695	-				+0.8
1,575,732	+				+0.2
1,575,733	-				-1.3
1,575,733	-				+0.0
1,575,733	-				-0.4
1,575,733	-				+0.3
1,575,794	-				-0.1
1,575,873	+				+0.1
1,575,873	+				+0.1
1,575,873	+				-1.2
1,575,874	-				+0.7
1,575,879	+				-0.5
1,575,879	+				+0.1
1,576,048	+				+0.1
1,576,048	+				+0.7
1,576,049	-				+0.1
1,576,142	-				+0.5
1,576,922	-		GFF4626	0.48	-0.9
1,576,922	-		GFF4626	0.48	+0.1
1,577,416	+		GFF4626	0.73	+0.3
1,577,417	-		GFF4626	0.74	-0.1
1,577,417	-		GFF4626	0.74	-0.1
1,577,462	-		GFF4626	0.76	-0.8
1,577,462	-		GFF4626	0.76	-0.2
1,577,659	+		GFF4626	0.86	+0.1
1,577,659	+		GFF4626	0.86	+0.5
1,577,659	+		GFF4626	0.86	-0.9
1,577,660	-		GFF4626	0.86	+1.2
1,577,660	-		GFF4626	0.86	-2.2
1,577,766	+				-0.3
1,577,768	-				+0.9
1,577,768	-				-1.3
1,577,845	+				+0.2
1,578,074	+		GFF4627	0.64	+1.0
1,578,105	-		GFF4627	0.75	-0.6
1,578,163	+				+0.1
1,578,163	+				+0.2
1,578,163	+				-0.5
1,578,164	-				-0.0
1,578,238	+				-0.3
1,578,238	+				+1.2
1,578,239	-				+0.2
1,578,273	-				+0.2
1,578,295	+				-0.0
1,578,296	-				+0.2
1,578,327	+				-0.1
1,578,327	+				+0.2
1,578,327	+				+0.9
1,578,328	-				+0.4
1,578,328	-				-0.3
1,578,333	-				-0.1
1,578,619	+		GFF4628	0.16	+0.1
1,578,885	+		GFF4628	0.28	+0.5
1,578,886	-		GFF4628	0.28	-0.2
1,578,894	+		GFF4628	0.29	+0.0
1,578,919	+		GFF4628	0.30	-0.9
1,578,920	-		GFF4628	0.30	+1.0
1,578,920	-		GFF4628	0.30	+1.0