Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4525

Experiment: Ying_sugar7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 1
1,453,416	-		GFF4525	0.12	+1.5
1,453,700	+		GFF4525	0.62	-0.7
1,453,700	+		GFF4525	0.62	+0.4
1,453,700	+		GFF4525	0.62	+0.2
1,453,701	-		GFF4525	0.62	+0.2
1,453,701	-		GFF4525	0.62	-0.1
1,453,701	-		GFF4525	0.62	-1.5
1,453,701	-		GFF4525	0.62	+0.6
1,453,751	+		GFF4525	0.71	-1.3
1,453,751	+		GFF4525	0.71	+0.2
1,453,752	-		GFF4525	0.71	-0.7
1,453,752	-		GFF4525	0.71	+1.0
1,453,752	-		GFF4525	0.71	+0.6
1,453,814	+		GFF4525	0.82	+2.3
1,453,814	+		GFF4525	0.82	-2.5
1,453,814	+		GFF4525	0.82	-0.3
1,453,814	+		GFF4525	0.82	-0.1
1,453,814	+		GFF4525	0.82	+0.5
1,453,814	+		GFF4525	0.82	-1.5
1,453,815	-		GFF4525	0.82	-0.9
1,453,835	+		GFF4525	0.85	-0.6
1,453,835	+		GFF4525	0.85	-1.5
1,453,835	+		GFF4525	0.85	-0.2
1,453,836	-		GFF4525	0.85	-1.0
1,453,909	+				+0.7
1,454,846	+				-0.9
1,454,846	+				-1.0
1,454,847	-				+0.7
1,454,847	-				+0.3