Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3645

Experiment: Ying_sugar7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 1
528,064	+				-0.4
528,113	+				+0.8
528,234	+		GFF3644	0.10	+0.3
528,309	+		GFF3644	0.19	+0.1
528,310	-		GFF3644	0.19	+0.4
528,310	-		GFF3644	0.19	+0.0
528,310	-		GFF3644	0.19	+1.3
528,410	+		GFF3644	0.31	+0.2
528,918	+				+1.6
528,918	+				-0.1
528,919	-				+0.2
528,919	-				-0.2
528,921	+				+0.3
528,922	-				+0.8
530,100	+		GFF3646	0.23	+0.5