Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3373

Experiment: Ying_sugar7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 1
257,535	+				-1.2
257,536	-				-0.1
258,131	-		GFF3373	0.67	+0.4
258,196	-		GFF3373	0.73	+0.8
258,196	-		GFF3373	0.73	+0.2
258,360	+		GFF3373	0.90	+0.3
258,361	-		GFF3373	0.90	-0.1
258,366	+				+0.8
258,366	+				-0.1
258,367	-				-0.3
258,475	-				-0.2
258,828	-		GFF3374	0.11	-1.5
259,248	-		GFF3374	0.28	-0.1
259,248	-		GFF3374	0.28	+0.1