Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2539

Experiment: Ying_sugar7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 1
124,133	+				-0.7
124,133	+				-1.1
124,134	-				-1.0
124,134	-				+0.7
124,134	-				-0.5
124,134	-				-1.0
124,173	+				-0.1
124,251	+		GFF2537	0.17	+0.2
124,251	+		GFF2537	0.17	-1.2
124,453	+		GFF2537	0.49	+0.3
125,024	+				-0.8
125,024	+				+0.9
125,025	-				-0.7
125,062	+				-2.0
125,063	-				+0.3
125,063	-				+0.9
125,404	+		GFF2539	0.29	-0.3
125,404	+		GFF2539	0.29	-1.0
125,447	-		GFF2539	0.33	-0.0
125,500	+		GFF2539	0.38	+0.1
125,500	+		GFF2539	0.38	-1.2
125,500	+		GFF2539	0.38	-0.2
126,082	+				+0.1
126,083	-				-0.2
126,083	-				-0.1
126,304	+				+0.6
126,481	+				+0.0
126,663	-				+0.2
126,663	-				-0.4
126,665	+				+0.4
126,665	+				-1.0
126,665	+				+0.8
126,666	-				+0.2
126,666	-				+0.4
126,666	-				+1.2
126,890	+		GFF2540	0.14	+0.2