Strain Fitness in Escherichia fergusonii Becca around EFB2_04181

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
4,382,351	+				-2.8
4,382,351	+				+1.6
4,382,352	-				+0.2
4,382,352	-				-1.3
4,382,369	+		EFB2_04180	0.13	+3.4
4,382,369	+		EFB2_04180	0.13	-0.8
4,382,370	-		EFB2_04180	0.13	+0.6
4,382,408	+		EFB2_04180	0.20	-0.8
4,382,408	+		EFB2_04180	0.20	+0.8
4,382,408	+		EFB2_04180	0.20	+3.0
4,382,408	+		EFB2_04180	0.20	+0.3
4,382,409	-		EFB2_04180	0.20	+2.2
4,382,409	-		EFB2_04180	0.20	-0.9
4,382,409	-		EFB2_04180	0.20	-2.7
4,382,409	-		EFB2_04180	0.20	-1.9
4,382,409	-		EFB2_04180	0.20	+1.1
4,382,409	-		EFB2_04180	0.20	+0.9
4,382,465	+		EFB2_04180	0.31	-2.0
4,382,471	+		EFB2_04180	0.32	-1.7
4,382,472	-		EFB2_04180	0.32	+4.1
4,382,474	+		EFB2_04180	0.33	+2.6
4,382,474	+		EFB2_04180	0.33	-2.0
4,382,474	+		EFB2_04180	0.33	-2.1
4,382,474	+		EFB2_04180	0.33	+4.1
4,382,474	+		EFB2_04180	0.33	-0.8
4,382,475	-		EFB2_04180	0.33	-1.9
4,382,475	-		EFB2_04180	0.33	-2.4
4,382,475	-		EFB2_04180	0.33	+4.9
4,382,475	-		EFB2_04180	0.33	+0.8
4,382,475	-		EFB2_04180	0.33	+0.5
4,382,483	+		EFB2_04180	0.34	-3.1
4,382,483	+		EFB2_04180	0.34	-1.5
4,382,484	-		EFB2_04180	0.35	-1.0
4,382,501	+		EFB2_04180	0.38	-1.0
4,382,526	+		EFB2_04180	0.43	+2.2
4,382,527	-		EFB2_04180	0.43	-1.1
4,382,527	-		EFB2_04180	0.43	-0.9
4,382,553	+		EFB2_04180	0.48	-0.2
4,382,553	+		EFB2_04180	0.48	-2.3
4,382,554	-		EFB2_04180	0.48	-2.1
4,382,554	-		EFB2_04180	0.48	+0.1
4,382,554	-		EFB2_04180	0.48	-3.0
4,382,565	+		EFB2_04180	0.50	-0.4
4,382,565	+		EFB2_04180	0.50	-0.3
4,382,565	+		EFB2_04180	0.50	+0.6
4,382,565	+		EFB2_04180	0.50	+2.0
4,382,565	+		EFB2_04180	0.50	+0.5
4,382,565	+		EFB2_04180	0.50	+2.4
4,382,565	+		EFB2_04180	0.50	+4.2
4,382,565	+		EFB2_04180	0.50	+0.3
4,382,565	+		EFB2_04180	0.50	-0.1
4,382,565	+		EFB2_04180	0.50	-2.5
4,382,565	+		EFB2_04180	0.50	-1.8
4,382,565	+		EFB2_04180	0.50	+0.0
4,382,566	-		EFB2_04180	0.50	+1.8
4,382,566	-		EFB2_04180	0.50	-1.7
4,382,566	-		EFB2_04180	0.50	-1.4
4,382,566	-		EFB2_04180	0.50	-2.5
4,382,566	-		EFB2_04180	0.50	+3.4
4,382,566	-		EFB2_04180	0.50	+2.6
4,382,566	-		EFB2_04180	0.50	-0.2
4,382,566	-		EFB2_04180	0.50	-1.1
4,382,576	+		EFB2_04180	0.52	-2.1
4,382,576	+		EFB2_04180	0.52	+2.5
4,382,576	+		EFB2_04180	0.52	+0.3
4,382,576	+		EFB2_04180	0.52	-1.5
4,382,577	-		EFB2_04180	0.53	-0.6
4,382,577	-		EFB2_04180	0.53	-1.9
4,382,577	-		EFB2_04180	0.53	+1.6
4,382,577	-		EFB2_04180	0.53	+1.0
4,382,577	-		EFB2_04180	0.53	-0.4
4,382,580	+		EFB2_04180	0.53	-2.6
4,382,580	+		EFB2_04180	0.53	+2.5
4,382,580	+		EFB2_04180	0.53	-0.6
4,382,580	+		EFB2_04180	0.53	+2.0
4,382,580	+		EFB2_04180	0.53	-0.5
4,382,580	+		EFB2_04180	0.53	-0.4
4,382,580	+		EFB2_04180	0.53	+1.6
4,382,580	+		EFB2_04180	0.53	+0.6
4,382,580	+		EFB2_04180	0.53	-2.0
4,382,580	+		EFB2_04180	0.53	+0.7
4,382,580	+		EFB2_04180	0.53	-0.7
4,382,580	+		EFB2_04180	0.53	-1.5
4,382,580	+		EFB2_04180	0.53	+2.3
4,382,580	+		EFB2_04180	0.53	-0.8
4,382,581	-		EFB2_04180	0.53	-1.3
4,382,581	-		EFB2_04180	0.53	+2.1
4,382,581	-		EFB2_04180	0.53	-1.2
4,382,581	-		EFB2_04180	0.53	-1.3
4,382,581	-		EFB2_04180	0.53	+0.5
4,382,581	-		EFB2_04180	0.53	-1.6
4,382,581	-		EFB2_04180	0.53	+3.9
4,382,581	-		EFB2_04180	0.53	-1.4
4,382,581	-		EFB2_04180	0.53	+1.9
4,382,581	-		EFB2_04180	0.53	-2.0
4,382,581	-		EFB2_04180	0.53	+1.5
4,382,582	+		EFB2_04180	0.54	-2.0
4,382,583	-		EFB2_04180	0.54	-1.8
4,382,583	-		EFB2_04180	0.54	+1.9
4,382,583	-		EFB2_04180	0.54	-2.2
4,382,583	-		EFB2_04180	0.54	-0.4
4,382,583	-		EFB2_04180	0.54	-0.8
4,382,588	+		EFB2_04180	0.55	+0.9
4,382,589	-		EFB2_04180	0.55	-2.4
4,382,653	+		EFB2_04180	0.67	+2.6
4,382,653	+		EFB2_04180	0.67	-1.2
4,382,653	+		EFB2_04180	0.67	-1.0
4,382,653	+		EFB2_04180	0.67	-1.4
4,382,654	-		EFB2_04180	0.67	-2.1
4,382,654	-		EFB2_04180	0.67	+3.2
4,382,654	-		EFB2_04180	0.67	-1.0
4,382,654	-		EFB2_04180	0.67	-2.0
4,382,654	-		EFB2_04180	0.67	-1.1
4,382,654	-		EFB2_04180	0.67	-2.1
4,382,654	-		EFB2_04180	0.67	+2.0
4,382,654	-		EFB2_04180	0.67	+3.8
4,382,654	-		EFB2_04180	0.67	+0.8
4,382,682	+		EFB2_04180	0.73	-1.2
4,382,682	+		EFB2_04180	0.73	-2.6
4,382,682	+		EFB2_04180	0.73	-1.3
4,382,682	+		EFB2_04180	0.73	+1.1
4,382,682	+		EFB2_04180	0.73	-1.0
4,382,683	-		EFB2_04180	0.73	+2.1
4,382,683	-		EFB2_04180	0.73	-1.3
4,382,683	-		EFB2_04180	0.73	+2.6
4,382,683	-		EFB2_04180	0.73	-2.5
4,382,683	-		EFB2_04180	0.73	+1.1
4,382,687	+		EFB2_04180	0.74	-2.0
4,382,687	+		EFB2_04180	0.74	-1.3
4,382,687	+		EFB2_04180	0.74	+4.5
4,382,687	+		EFB2_04180	0.74	-2.0
4,382,688	-		EFB2_04180	0.74	-2.1
4,382,688	-		EFB2_04180	0.74	-1.0
4,382,688	-		EFB2_04180	0.74	-1.8
4,382,688	-		EFB2_04180	0.74	+0.0
4,382,688	-		EFB2_04180	0.74	+0.3
4,382,748	-		EFB2_04180	0.86	+0.2
4,382,768	+		EFB2_04180	0.89	-1.9
4,382,768	+		EFB2_04180	0.89	+0.2
4,382,768	+		EFB2_04180	0.89	+1.5
4,382,768	+		EFB2_04180	0.89	-1.1
4,382,769	-		EFB2_04180	0.90	-0.6
4,382,769	-		EFB2_04180	0.90	-0.6
4,382,769	-		EFB2_04180	0.90	-1.0
4,382,769	-		EFB2_04180	0.90	+4.3
4,382,769	-		EFB2_04180	0.90	+2.5
4,382,769	-		EFB2_04180	0.90	-2.0
4,382,769	-		EFB2_04180	0.90	-2.0
4,382,769	-		EFB2_04180	0.90	-1.7
4,382,771	+				+3.1
4,382,771	+				-1.0
4,382,771	+				-2.2
4,382,771	+				-2.0
4,382,771	+				-0.2
4,382,772	-				+0.3
4,382,772	-				-1.8
4,382,792	+				+0.1
4,382,792	+				-0.1
4,382,792	+				+0.2
4,382,792	+				+0.8
4,382,792	+				-0.8
4,382,792	+				-0.5
4,382,792	+				-0.9
4,382,792	+				-0.5
4,382,793	-				-1.5
4,382,798	+				-2.5
4,382,798	+				-0.3
4,382,799	-				-1.3
4,382,799	-				+5.5
4,382,799	-				+1.5
4,382,815	+				-1.8
4,382,815	+				+3.6
4,382,815	+				-1.8
4,382,815	+				-3.0
4,382,816	-				-0.6
4,382,816	-				+2.3
4,382,816	-				+4.2
4,382,816	-				-1.0
4,382,816	-				+0.8
4,382,816	-				-2.0
4,382,820	+				+0.7
4,382,821	-				-2.2
4,382,821	-				+3.7
4,382,839	+				+3.9
4,382,903	-				-3.3
4,382,903	-				+0.3
4,382,913	+				+0.3
4,382,914	-				-0.2
4,382,934	+				-1.5
4,382,934	+				+2.3
4,382,934	+				+0.5
4,382,934	+				+3.0
4,382,934	+				+0.9
4,382,934	+				+1.4
4,382,934	+				-1.5
4,382,934	+				-0.9
4,382,934	+				-0.2
4,382,935	-				+0.5
4,382,935	-				+2.2
4,382,935	-				+2.6
4,382,935	-				+1.3
4,382,935	-				+1.1
4,382,935	-				+1.9
4,382,935	-				+1.5
4,382,935	-				+6.5
4,382,994	+				-0.6
4,382,995	-				-1.7
4,383,011	+				-2.2
4,383,011	+				-0.5
4,383,011	+				-1.7
4,383,011	+				+0.9
4,383,011	+				-2.0
4,383,011	+				+0.8
4,383,011	+				+2.6
4,383,011	+				-1.0
4,383,011	+				-2.1
4,383,012	-				-1.0
4,383,012	-				-2.1
4,383,012	-				+0.8
4,383,012	-				+0.7
4,383,012	-				-3.3
4,383,012	-				+0.0
4,383,012	-				-1.9
4,383,012	-				-2.0
4,383,038	+				-2.6
4,383,038	+				+0.9
4,383,039	-				-0.4
4,383,039	-				-1.2
4,383,058	+				+0.5
4,383,063	-				+0.0
4,383,066	+				-2.2
4,383,067	-				-2.4
4,383,067	-				+1.3
4,383,074	+				+0.1
4,383,074	+				+2.9
4,383,074	+				+0.9
4,383,075	-				+1.6
4,383,102	+				+2.3
4,383,119	+				+0.1
4,383,119	+				+3.4
4,383,157	+				+1.9
4,383,157	+				-1.4
4,383,174	-				-0.8
4,383,174	-				+0.2
4,383,174	-				+0.6
4,383,197	+				+0.3
4,383,252	+				-2.5
4,383,252	+				-2.9
4,383,252	+				+0.6
4,383,253	-				+0.5
4,383,254	+				+0.3
4,383,254	+				-1.5
4,383,255	-				-2.1
4,383,255	-				+0.5
4,383,284	+				+0.7
4,383,285	-				-0.9
4,383,285	-				+1.4
4,383,285	-				+0.6
4,383,355	+				+1.8
4,383,356	-				+0.1
4,383,356	-				+5.7
4,383,389	+		EFB2_04181	0.17	-0.1
4,383,389	+		EFB2_04181	0.17	-0.9
4,383,389	+		EFB2_04181	0.17	+1.0
4,383,389	+		EFB2_04181	0.17	+3.9
4,383,390	-		EFB2_04181	0.17	-2.8
4,383,413	+		EFB2_04181	0.25	-2.1
4,383,413	+		EFB2_04181	0.25	+1.6
4,383,413	+		EFB2_04181	0.25	+0.0
4,383,414	-		EFB2_04181	0.26	+2.0
4,383,414	-		EFB2_04181	0.26	-1.3
4,383,414	-		EFB2_04181	0.26	-1.4
4,383,602	+				-2.0
4,383,605	+				+0.6
4,383,605	+				-1.5
4,383,605	+				-1.2
4,383,606	-				+1.6
4,383,606	-				-1.5
4,383,606	-				+1.6
4,383,611	+				+1.2
4,383,611	+				+2.7
4,383,611	+				+2.8
4,383,611	+				-0.2
4,383,611	+				-0.2
4,383,611	+				+2.4
4,383,612	-				+3.8
4,383,612	-				-1.5
4,383,612	-				-1.8
4,383,612	-				-2.1
4,383,651	+				+0.2
4,383,651	+				+0.1
4,383,651	+				+0.6
4,383,651	+				-0.2
4,383,651	+				-1.6
4,383,651	+				+4.0
4,383,651	+				+2.4
4,383,651	+				+0.6
4,383,651	+				-0.3
4,383,652	-				-0.2
4,383,652	-				-0.8
4,383,652	-				-1.6
4,383,652	-				-1.8
4,383,652	-				-1.5
4,383,652	-				-0.1
4,383,685	+		EFB2_04182	0.16	+1.4
4,383,685	+		EFB2_04182	0.16	-1.4
4,383,685	+		EFB2_04182	0.16	-1.2
4,383,685	+		EFB2_04182	0.16	-2.3
4,383,685	+		EFB2_04182	0.16	+0.5
4,383,686	-		EFB2_04182	0.17	+4.5
4,383,686	-		EFB2_04182	0.17	+0.9
4,383,686	-		EFB2_04182	0.17	+2.0
4,383,686	-		EFB2_04182	0.17	-1.0
4,383,686	-		EFB2_04182	0.17	-0.2
4,383,686	-		EFB2_04182	0.17	+2.2
4,383,710	-		EFB2_04182	0.25	+2.8
4,383,710	-		EFB2_04182	0.25	+1.9
4,383,710	-		EFB2_04182	0.25	+1.9
4,383,710	-		EFB2_04182	0.25	+2.5
4,383,710	-		EFB2_04182	0.25	+5.7
4,383,710	-		EFB2_04182	0.25	-1.6
4,383,710	-		EFB2_04182	0.25	-1.2
4,383,795	+		EFB2_04182	0.55	-1.5
4,383,796	-		EFB2_04182	0.55	+2.8
4,383,796	-		EFB2_04182	0.55	-0.6
4,383,905	+				+0.6
4,383,906	-				+4.4
4,383,906	-				-0.5
4,383,914	-				+0.7
4,383,935	+				+3.6
4,383,935	+				-1.9
4,383,935	+				-2.0
4,383,935	+				-1.8
4,383,935	+				+1.7
4,383,935	+				-2.6
4,383,936	-				-1.3
4,383,936	-				-1.5
4,383,984	+		EFB2_04183	0.17	+0.8
4,383,984	+		EFB2_04183	0.17	-2.7
4,383,984	+		EFB2_04183	0.17	+1.2
4,383,985	-		EFB2_04183	0.17	+0.2
4,383,985	-		EFB2_04183	0.17	+0.6
4,383,985	-		EFB2_04183	0.17	+2.6
4,383,985	-		EFB2_04183	0.17	-0.1
4,383,985	-		EFB2_04183	0.17	-0.4
4,383,985	-		EFB2_04183	0.17	-0.6
4,384,009	-		EFB2_04183	0.26	-3.3
4,384,009	-		EFB2_04183	0.26	-1.9
4,384,009	-		EFB2_04183	0.26	+0.3
4,384,009	-		EFB2_04183	0.26	-0.7
4,384,009	-		EFB2_04183	0.26	-1.8
4,384,059	-		EFB2_04183	0.44	-2.4
4,384,073	+		EFB2_04183	0.49	+3.2
4,384,073	+		EFB2_04183	0.49	-0.4
4,384,074	-		EFB2_04183	0.49	-1.2
4,384,074	-		EFB2_04183	0.49	+4.2
4,384,074	-		EFB2_04183	0.49	-2.8
4,384,134	+		EFB2_04183	0.71	+1.4
4,384,134	+		EFB2_04183	0.71	+5.3
4,384,135	-		EFB2_04183	0.71	-2.0
4,384,135	-		EFB2_04183	0.71	-0.9
4,384,176	+		EFB2_04183	0.86	-1.4
4,384,177	-		EFB2_04183	0.86	+3.6
4,384,206	+				-0.3
4,384,207	-				-1.3
4,384,207	-				-1.9
4,384,207	-				-2.4
4,384,247	+				-1.9
4,384,248	-				-0.1
4,384,248	-				-2.5
4,384,262	+				-0.5
4,384,263	-				+0.2
4,384,325	+				-1.5
4,384,475	+		EFB2_04184	0.13	-2.4
4,384,475	+		EFB2_04184	0.13	-0.1
4,384,512	+		EFB2_04184	0.15	-0.1
4,384,513	-		EFB2_04184	0.15	+2.1
4,384,513	-		EFB2_04184	0.15	+2.4
4,384,513	-		EFB2_04184	0.15	+1.0
4,384,513	-		EFB2_04184	0.15	+0.2
4,384,529	+		EFB2_04184	0.16	+1.3
4,384,529	+		EFB2_04184	0.16	+0.5
4,384,529	+		EFB2_04184	0.16	+4.4
4,384,529	+		EFB2_04184	0.16	+1.9
4,384,529	+		EFB2_04184	0.16	+0.1
4,384,529	+		EFB2_04184	0.16	-1.8
4,384,529	+		EFB2_04184	0.16	-3.1
4,384,529	+		EFB2_04184	0.16	-2.4
4,384,530	-		EFB2_04184	0.16	-0.9
4,384,530	-		EFB2_04184	0.16	+2.9
4,384,530	-		EFB2_04184	0.16	-1.0
4,384,530	-		EFB2_04184	0.16	-1.3