Strain Fitness in Escherichia fergusonii Becca around EFB2_03894

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
4,076,726	+		EFB2_03892	0.84	-2.3
4,076,726	+		EFB2_03892	0.84	-1.5
4,076,726	+		EFB2_03892	0.84	-1.5
4,076,726	+		EFB2_03892	0.84	-1.3
4,076,726	+		EFB2_03892	0.84	+3.7
4,076,726	+		EFB2_03892	0.84	+1.1
4,076,726	+		EFB2_03892	0.84	-2.5
4,076,727	-		EFB2_03892	0.84	-2.2
4,076,727	-		EFB2_03892	0.84	+5.3
4,076,727	-		EFB2_03892	0.84	-1.3
4,076,727	-		EFB2_03892	0.84	+0.5
4,076,758	+		EFB2_03892	0.87	+0.3
4,076,758	+		EFB2_03892	0.87	-0.7
4,076,758	+		EFB2_03892	0.87	+2.4
4,076,759	-		EFB2_03892	0.88	-0.7
4,076,759	-		EFB2_03892	0.88	+1.8
4,076,759	-		EFB2_03892	0.88	-1.8
4,076,759	-		EFB2_03892	0.88	-1.9
4,076,759	-		EFB2_03892	0.88	-2.9
4,076,759	-		EFB2_03892	0.88	+0.9
4,076,759	-		EFB2_03892	0.88	-1.2
4,076,759	-		EFB2_03892	0.88	+1.9
4,076,773	+		EFB2_03892	0.89	-1.2
4,076,773	+		EFB2_03892	0.89	-0.3
4,076,773	+		EFB2_03892	0.89	+0.6
4,076,773	+		EFB2_03892	0.89	-0.3
4,076,773	+		EFB2_03892	0.89	+2.7
4,076,773	+		EFB2_03892	0.89	+1.2
4,076,773	+		EFB2_03892	0.89	-0.5
4,076,773	+		EFB2_03892	0.89	+5.0
4,076,774	-		EFB2_03892	0.89	-2.4
4,076,774	-		EFB2_03892	0.89	+5.7
4,076,774	-		EFB2_03892	0.89	+3.7
4,076,774	-		EFB2_03892	0.89	-1.4
4,076,774	-		EFB2_03892	0.89	+0.5
4,076,774	-		EFB2_03892	0.89	-0.0
4,076,774	-		EFB2_03892	0.89	+3.7
4,076,774	-		EFB2_03892	0.89	+1.5
4,076,804	+				+2.2
4,076,804	+				-2.0
4,076,805	-				+3.3
4,076,805	-				+3.7
4,076,805	-				-0.0
4,076,851	+				-1.0
4,076,851	+				+4.1
4,076,858	+				+1.2
4,076,858	+				+0.4
4,076,858	+				+2.3
4,076,859	-				-0.2
4,076,859	-				-2.3
4,076,859	-				+0.9
4,076,874	-				+4.9
4,076,916	+				+5.3
4,076,933	+				+0.8
4,076,933	+				+2.8
4,076,934	-				-0.7
4,076,934	-				-2.5
4,076,962	-		EFB2_03893	0.12	-0.2
4,076,962	-		EFB2_03893	0.12	+4.3
4,076,962	-		EFB2_03893	0.12	-0.7
4,077,017	+		EFB2_03893	0.19	-1.3
4,077,018	-		EFB2_03893	0.19	-1.8
4,077,018	-		EFB2_03893	0.19	-1.4
4,077,026	+		EFB2_03893	0.20	+2.2
4,077,027	-		EFB2_03893	0.20	-1.6
4,077,039	+		EFB2_03893	0.21	-1.4
4,077,040	-		EFB2_03893	0.21	-2.9
4,077,040	-		EFB2_03893	0.21	+1.8
4,077,040	-		EFB2_03893	0.21	+0.3
4,077,045	+		EFB2_03893	0.22	-1.8
4,077,109	+		EFB2_03893	0.30	+4.1
4,077,109	+		EFB2_03893	0.30	+0.1
4,077,109	+		EFB2_03893	0.30	-2.3
4,077,109	+		EFB2_03893	0.30	+0.4
4,077,109	+		EFB2_03893	0.30	+1.6
4,077,109	+		EFB2_03893	0.30	-1.7
4,077,109	+		EFB2_03893	0.30	+0.1
4,077,109	+		EFB2_03893	0.30	-1.2
4,077,109	+		EFB2_03893	0.30	-0.1
4,077,110	-		EFB2_03893	0.30	+2.4
4,077,110	-		EFB2_03893	0.30	+3.5
4,077,110	-		EFB2_03893	0.30	-0.8
4,077,110	-		EFB2_03893	0.30	+0.2
4,077,110	-		EFB2_03893	0.30	+0.5
4,077,110	-		EFB2_03893	0.30	-1.5
4,077,110	-		EFB2_03893	0.30	+7.5
4,077,110	-		EFB2_03893	0.30	-1.1
4,077,110	-		EFB2_03893	0.30	+1.0
4,077,229	-		EFB2_03893	0.45	+0.5
4,077,256	+		EFB2_03893	0.48	+1.0
4,077,257	-		EFB2_03893	0.49	+1.9
4,077,257	-		EFB2_03893	0.49	-1.5
4,077,273	+		EFB2_03893	0.51	+3.5
4,077,273	+		EFB2_03893	0.51	+0.3
4,077,273	+		EFB2_03893	0.51	+1.8
4,077,273	+		EFB2_03893	0.51	+1.7
4,077,273	+		EFB2_03893	0.51	+2.9
4,077,273	+		EFB2_03893	0.51	-0.1
4,077,273	+		EFB2_03893	0.51	-0.5
4,077,273	+		EFB2_03893	0.51	-0.7
4,077,273	+		EFB2_03893	0.51	+3.9
4,077,274	-		EFB2_03893	0.51	-0.8
4,077,274	-		EFB2_03893	0.51	+1.2
4,077,274	-		EFB2_03893	0.51	+2.4
4,077,274	-		EFB2_03893	0.51	-1.6
4,077,274	-		EFB2_03893	0.51	+0.4
4,077,397	+		EFB2_03893	0.66	+0.5
4,077,398	-		EFB2_03893	0.66	-1.6
4,077,398	-		EFB2_03893	0.66	-1.7
4,077,401	+		EFB2_03893	0.67	+0.5
4,077,401	+		EFB2_03893	0.67	+0.2
4,077,401	+		EFB2_03893	0.67	-1.4
4,077,401	+		EFB2_03893	0.67	-1.8
4,077,401	+		EFB2_03893	0.67	-0.9
4,077,401	+		EFB2_03893	0.67	+2.2
4,077,401	+		EFB2_03893	0.67	-0.5
4,077,401	+		EFB2_03893	0.67	-0.5
4,077,402	-		EFB2_03893	0.67	+0.9
4,077,402	-		EFB2_03893	0.67	-1.0
4,077,402	-		EFB2_03893	0.67	-2.9
4,077,402	-		EFB2_03893	0.67	-1.6
4,077,402	-		EFB2_03893	0.67	-1.8
4,077,402	-		EFB2_03893	0.67	+0.5
4,077,519	+		EFB2_03893	0.81	+6.1
4,077,520	-		EFB2_03893	0.82	+0.3
4,077,618	+				-1.9
4,077,618	+				+3.6
4,077,618	+				+0.6
4,077,618	+				-0.6
4,077,618	+				+1.4
4,077,618	+				-0.7
4,077,618	+				-0.6
4,077,619	-				+1.7
4,077,619	-				+0.2
4,077,619	-				+1.3
4,077,619	-				-2.3
4,077,619	-				-0.6
4,077,619	-				+2.3
4,077,619	-				+1.0
4,077,619	-				+0.8
4,077,619	-				-2.3
4,077,619	-				+0.8
4,077,619	-				+2.1
4,077,621	+				+0.9
4,077,621	+				+2.9
4,077,621	+				-1.3
4,077,621	+				+3.3
4,077,621	+				-2.3
4,077,621	+				-0.8
4,077,621	+				-0.5
4,077,621	+				-1.7
4,077,621	+				+4.8
4,077,621	+				-1.0
4,077,622	-				-1.1
4,077,622	-				+6.4
4,077,622	-				-1.5
4,077,622	-				-0.7
4,077,622	-				-1.5
4,077,622	-				+2.1
4,077,622	-				-2.7
4,077,622	-				+2.0
4,077,622	-				+3.1
4,077,622	-				+2.6
4,077,622	-				-2.7
4,077,622	-				-0.5
4,077,622	-				+1.3
4,077,622	-				-1.2
4,077,656	+				-0.7
4,077,656	+				-1.7
4,077,657	-				+0.9
4,077,666	+				-1.0
4,077,666	+				-0.7
4,077,666	+				+0.8
4,077,667	-				+0.9
4,077,719	-				+0.9
4,077,719	-				-0.2
4,077,775	+				-0.6
4,077,775	+				+0.2
4,077,775	+				-2.2
4,077,775	+				+0.8
4,077,775	+				-0.7
4,077,775	+				-1.4
4,077,775	+				+2.1
4,077,775	+				-1.4
4,077,775	+				+1.1
4,077,775	+				-0.2
4,077,775	+				-0.4
4,077,775	+				+7.1
4,077,775	+				-1.5
4,077,775	+				-0.0
4,077,775	+				+2.3
4,077,775	+				-0.0
4,077,775	+				-2.6
4,077,775	+				-0.6
4,077,775	+				-0.7
4,077,775	+				+0.5
4,077,775	+				+3.9
4,077,775	+				-0.8
4,077,775	+				+1.1
4,077,775	+				+2.2
4,077,775	+				-1.1
4,077,775	+				+0.3
4,077,775	+				+2.1
4,077,775	+				+1.8
4,077,775	+				-1.0
4,077,775	+				-1.2
4,077,775	+				-1.2
4,077,775	+				-0.2
4,077,776	-				+1.0
4,077,776	-				+0.4
4,077,776	-				-0.0
4,077,776	-				+0.2
4,077,776	-				-0.5
4,077,776	-				+2.8
4,077,776	-				-0.1
4,077,776	-				-0.7
4,077,776	-				+0.9
4,077,776	-				-1.4
4,077,776	-				-0.3
4,077,776	-				-0.4
4,077,776	-				-0.1
4,077,776	-				+0.0
4,077,776	-				+0.3
4,077,776	-				-0.3
4,077,776	-				+1.5
4,077,776	-				+1.5
4,077,776	-				+6.0
4,077,776	-				-1.7
4,077,776	-				+3.2
4,077,776	-				+0.7
4,077,776	-				-2.9
4,077,776	-				-3.1
4,077,776	-				-1.5
4,077,776	-				-0.1
4,077,776	-				+0.4
4,077,776	-				-1.7
4,077,776	-				-1.9
4,077,776	-				-2.2
4,077,776	-				-0.3
4,077,776	-				-1.7
4,077,776	-				-1.7
4,077,776	-				+0.2
4,077,776	-				-1.2
4,077,776	-				-1.8
4,077,776	-				-0.3
4,077,776	-				+0.5
4,077,776	-				-1.6
4,077,782	+				+0.1
4,077,799	+				-1.1
4,077,799	+				+1.3
4,077,799	+				-2.2
4,077,799	+				+1.5
4,077,800	-				-0.7
4,077,800	-				-0.7
4,077,800	-				-0.0
4,077,800	-				+0.3
4,077,800	-				-0.7
4,077,800	-				-1.2
4,077,871	+				+0.7
4,077,871	+				-2.2
4,077,871	+				-1.6
4,077,871	+				-0.5
4,077,872	-				+2.3
4,077,879	+				-2.0
4,077,880	-				-2.3
4,077,896	+				-1.1
4,077,896	+				+1.8
4,077,896	+				-0.4
4,077,896	+				-0.8
4,077,896	+				+0.7
4,077,896	+				-0.4
4,077,896	+				-1.7
4,077,896	+				-0.4
4,077,897	-				-0.7
4,077,897	-				-2.1
4,077,897	-				-1.8
4,077,897	-				-0.6
4,077,897	-				-2.1
4,077,897	-				-1.1
4,077,897	-				-0.8
4,077,897	-				-1.2
4,077,897	-				+2.7
4,077,898	+				-1.2
4,077,898	+				-0.9
4,077,898	+				+0.4
4,077,898	+				+3.4
4,077,898	+				+3.8
4,077,898	+				+0.1
4,077,899	-				-1.2
4,077,899	-				+1.5
4,077,899	-				+1.7
4,077,899	-				-2.0
4,077,899	-				-1.7
4,077,899	-				+2.2
4,077,899	-				-1.1
4,077,911	+				-0.3
4,077,911	+				+0.3
4,077,912	-				+3.9
4,077,921	-				-1.9
4,077,934	+				+2.2
4,077,934	+				-0.3
4,077,934	+				+4.8
4,077,934	+				-0.1
4,077,934	+				-3.1
4,077,934	+				-2.5
4,077,934	+				-0.0
4,077,934	+				-0.4
4,077,934	+				+2.0
4,077,934	+				+0.7
4,077,935	-				-2.2
4,077,935	-				-2.8
4,077,935	-				+1.3
4,077,935	-				-2.0
4,077,935	-				+1.3
4,077,947	+		EFB2_03894	0.10	+1.5
4,077,947	+		EFB2_03894	0.10	-1.0
4,077,947	+		EFB2_03894	0.10	-0.1
4,077,948	-		EFB2_03894	0.10	+1.2
4,077,948	-		EFB2_03894	0.10	+1.9
4,077,948	-		EFB2_03894	0.10	+1.3
4,077,948	-		EFB2_03894	0.10	-0.3
4,077,948	-		EFB2_03894	0.10	+1.4
4,077,948	-		EFB2_03894	0.10	-0.2
4,077,948	-		EFB2_03894	0.10	-0.2
4,077,948	-		EFB2_03894	0.10	+1.7
4,077,948	-		EFB2_03894	0.10	-1.7
4,077,949	+		EFB2_03894	0.10	+1.0
4,077,949	+		EFB2_03894	0.10	+0.5
4,077,950	-		EFB2_03894	0.10	-3.4
4,077,950	-		EFB2_03894	0.10	-2.0
4,078,001	+		EFB2_03894	0.13	-2.6
4,078,001	+		EFB2_03894	0.13	+1.9
4,078,001	+		EFB2_03894	0.13	+1.0
4,078,001	+		EFB2_03894	0.13	+1.1
4,078,001	+		EFB2_03894	0.13	-0.4
4,078,001	+		EFB2_03894	0.13	-2.4
4,078,001	+		EFB2_03894	0.13	-1.5
4,078,001	+		EFB2_03894	0.13	+0.5
4,078,001	+		EFB2_03894	0.13	-1.0
4,078,001	+		EFB2_03894	0.13	-0.1
4,078,001	+		EFB2_03894	0.13	-0.9
4,078,001	+		EFB2_03894	0.13	-2.3
4,078,002	-		EFB2_03894	0.13	-0.8
4,078,002	-		EFB2_03894	0.13	+1.3
4,078,002	-		EFB2_03894	0.13	-2.8
4,078,002	-		EFB2_03894	0.13	-0.7
4,078,002	-		EFB2_03894	0.13	-0.7
4,078,002	-		EFB2_03894	0.13	+0.9
4,078,002	-		EFB2_03894	0.13	+1.1
4,078,002	-		EFB2_03894	0.13	-3.3
4,078,002	-		EFB2_03894	0.13	-2.4
4,078,002	-		EFB2_03894	0.13	+3.5
4,078,002	-		EFB2_03894	0.13	+2.3
4,078,002	-		EFB2_03894	0.13	-0.3
4,078,002	-		EFB2_03894	0.13	-1.5
4,078,003	+		EFB2_03894	0.13	+1.2
4,078,003	+		EFB2_03894	0.13	+0.4
4,078,003	+		EFB2_03894	0.13	-2.6
4,078,003	+		EFB2_03894	0.13	+0.1
4,078,003	+		EFB2_03894	0.13	-1.5
4,078,003	+		EFB2_03894	0.13	-0.8
4,078,003	+		EFB2_03894	0.13	+2.0
4,078,003	+		EFB2_03894	0.13	-2.3
4,078,003	+		EFB2_03894	0.13	+0.2
4,078,003	+		EFB2_03894	0.13	-0.2
4,078,003	+		EFB2_03894	0.13	+0.7
4,078,003	+		EFB2_03894	0.13	-1.7
4,078,004	-		EFB2_03894	0.13	-1.7
4,078,004	-		EFB2_03894	0.13	-0.4
4,078,004	-		EFB2_03894	0.13	-0.0
4,078,004	-		EFB2_03894	0.13	+2.3
4,078,004	-		EFB2_03894	0.13	+2.3
4,078,004	-		EFB2_03894	0.13	+0.2
4,078,004	-		EFB2_03894	0.13	-2.4
4,078,004	-		EFB2_03894	0.13	+1.4
4,078,004	-		EFB2_03894	0.13	+3.1
4,078,049	+		EFB2_03894	0.15	-1.4
4,078,049	+		EFB2_03894	0.15	-1.8
4,078,049	+		EFB2_03894	0.15	-0.4
4,078,049	+		EFB2_03894	0.15	-1.5
4,078,050	-		EFB2_03894	0.15	-0.6
4,078,050	-		EFB2_03894	0.15	-0.0
4,078,050	-		EFB2_03894	0.15	+0.1
4,078,060	+		EFB2_03894	0.15	-0.0
4,078,060	+		EFB2_03894	0.15	+2.6
4,078,060	+		EFB2_03894	0.15	-1.5
4,078,060	+		EFB2_03894	0.15	-1.7
4,078,060	+		EFB2_03894	0.15	-1.6
4,078,060	+		EFB2_03894	0.15	+1.6
4,078,060	+		EFB2_03894	0.15	+0.7
4,078,060	+		EFB2_03894	0.15	+1.5
4,078,060	+		EFB2_03894	0.15	-2.8
4,078,060	+		EFB2_03894	0.15	+0.4
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