Strain Fitness in Escherichia fergusonii Becca around EFB2_03817

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
3,996,012	+		EFB2_03816	0.28	-1.3
3,996,012	+		EFB2_03816	0.28	-2.5
3,996,012	+		EFB2_03816	0.28	+0.7
3,996,012	+		EFB2_03816	0.28	-0.7
3,996,012	+		EFB2_03816	0.28	-1.3
3,996,012	+		EFB2_03816	0.28	+0.3
3,996,013	-		EFB2_03816	0.28	+1.7
3,996,013	-		EFB2_03816	0.28	+2.5
3,996,013	-		EFB2_03816	0.28	-0.1
3,996,013	-		EFB2_03816	0.28	-0.6
3,996,013	-		EFB2_03816	0.28	-1.9
3,996,013	-		EFB2_03816	0.28	-0.8
3,996,016	+		EFB2_03816	0.29	+3.2
3,996,016	+		EFB2_03816	0.29	-1.5
3,996,016	+		EFB2_03816	0.29	-1.8
3,996,016	+		EFB2_03816	0.29	-0.5
3,996,016	+		EFB2_03816	0.29	-2.3
3,996,016	+		EFB2_03816	0.29	+4.6
3,996,016	+		EFB2_03816	0.29	-0.2
3,996,016	+		EFB2_03816	0.29	-1.8
3,996,016	+		EFB2_03816	0.29	+2.0
3,996,016	+		EFB2_03816	0.29	+0.0
3,996,016	+		EFB2_03816	0.29	-2.4
3,996,016	+		EFB2_03816	0.29	-2.7
3,996,017	-		EFB2_03816	0.29	-1.4
3,996,017	-		EFB2_03816	0.29	+0.3
3,996,017	-		EFB2_03816	0.29	-2.0
3,996,017	-		EFB2_03816	0.29	-2.0
3,996,046	+		EFB2_03816	0.31	-1.4
3,996,050	+		EFB2_03816	0.31	-2.1
3,996,050	+		EFB2_03816	0.31	-0.0
3,996,050	+		EFB2_03816	0.31	-1.4
3,996,050	+		EFB2_03816	0.31	+1.1
3,996,050	+		EFB2_03816	0.31	+0.4
3,996,050	+		EFB2_03816	0.31	-0.6
3,996,050	+		EFB2_03816	0.31	+2.9
3,996,050	+		EFB2_03816	0.31	-0.5
3,996,050	+		EFB2_03816	0.31	-1.2
3,996,050	+		EFB2_03816	0.31	-3.1
3,996,050	+		EFB2_03816	0.31	+1.8
3,996,050	+		EFB2_03816	0.31	-1.1
3,996,051	-		EFB2_03816	0.31	+1.5
3,996,051	-		EFB2_03816	0.31	-1.5
3,996,051	-		EFB2_03816	0.31	+0.3
3,996,051	-		EFB2_03816	0.31	+1.6
3,996,051	-		EFB2_03816	0.31	+0.8
3,996,291	+		EFB2_03816	0.50	+3.8
3,996,292	-		EFB2_03816	0.50	-2.0
3,996,292	-		EFB2_03816	0.50	-0.9
3,996,355	+		EFB2_03816	0.55	+1.4
3,996,355	+		EFB2_03816	0.55	-1.7
3,996,356	-		EFB2_03816	0.55	+0.3
3,996,356	-		EFB2_03816	0.55	-1.4
3,996,356	-		EFB2_03816	0.55	+0.2
3,996,369	-		EFB2_03816	0.56	-0.5
3,996,559	-		EFB2_03816	0.71	+1.2
3,996,559	-		EFB2_03816	0.71	+2.5
3,996,559	-		EFB2_03816	0.71	-1.4
3,996,565	+		EFB2_03816	0.71	+1.6
3,996,565	+		EFB2_03816	0.71	+2.2
3,996,565	+		EFB2_03816	0.71	-1.4
3,996,566	-		EFB2_03816	0.71	-0.2
3,996,600	+		EFB2_03816	0.74	+1.6
3,996,611	+		EFB2_03816	0.75	-1.4
3,996,611	+		EFB2_03816	0.75	+0.0
3,996,611	+		EFB2_03816	0.75	+1.8
3,996,612	-		EFB2_03816	0.75	-1.6
3,996,612	-		EFB2_03816	0.75	-1.7
3,996,814	+				-1.9
3,996,814	+				+3.4
3,996,814	+				-2.6
3,996,814	+				-2.2
3,996,814	+				+1.9
3,996,814	+				+0.1
3,996,814	+				-2.5
3,996,814	+				-2.1
3,996,814	+				-1.2
3,996,814	+				-1.9
3,996,814	+				-1.4
3,996,814	+				+0.1
3,996,814	+				+2.6
3,996,814	+				+0.5
3,996,815	-				+1.0
3,996,815	-				+1.3
3,996,815	-				-1.8
3,996,815	-				-1.3
3,996,815	-				-1.2
3,996,815	-				-2.8
3,996,815	-				+5.3
3,996,815	-				+2.3
3,996,815	-				-2.0
3,996,815	-				-0.0
3,996,815	-				+2.3
3,996,815	-				-3.1
3,996,815	-				-1.6
3,996,815	-				+0.1
3,996,823	+				+3.3
3,996,823	+				-3.1
3,996,823	+				+2.8
3,996,823	+				-0.2
3,996,823	+				-2.0
3,996,823	+				-1.5
3,996,823	+				+0.7
3,996,823	+				-0.0
3,996,823	+				+2.0
3,996,823	+				+0.3
3,996,823	+				-2.5
3,996,823	+				-0.4
3,996,823	+				-2.0
3,996,823	+				-0.2
3,996,824	-				-1.9
3,996,824	-				+1.7
3,996,824	-				+0.7
3,996,824	-				+2.2
3,996,824	-				+0.3
3,996,824	-				-2.1
3,996,824	-				-0.8
3,996,824	-				+0.1
3,996,824	-				-1.6
3,996,824	-				-1.2
3,996,824	-				-1.2
3,996,824	-				-0.6
3,996,824	-				-1.3
3,996,826	+				-1.9
3,996,826	+				+4.8
3,996,826	+				-1.9
3,996,826	+				-0.1
3,996,826	+				+2.1
3,996,827	-				-1.0
3,996,827	-				+1.5
3,996,827	-				-1.0
3,996,827	-				-1.8
3,996,827	-				+0.9
3,996,827	-				+0.9
3,996,883	+				-2.0
3,996,884	-				-0.7
3,996,884	-				-1.5
3,996,895	+				+1.6
3,996,895	+				+3.6
3,996,896	-				+0.8
3,996,896	-				+2.3
3,996,896	-				-2.3
3,996,896	-				-2.4
3,996,896	-				-2.5
3,996,896	-				-1.7
3,996,896	-				-1.3
3,996,982	+				+3.4
3,996,983	-				+1.8
3,997,152	+		EFB2_03817	0.41	+2.6
3,997,152	+		EFB2_03817	0.41	+2.2
3,997,152	+		EFB2_03817	0.41	-2.7
3,997,152	+		EFB2_03817	0.41	+0.5
3,997,152	+		EFB2_03817	0.41	-1.4
3,997,152	+		EFB2_03817	0.41	-2.8
3,997,152	+		EFB2_03817	0.41	+0.7
3,997,153	-		EFB2_03817	0.41	+0.0
3,997,153	-		EFB2_03817	0.41	+3.7
3,997,153	-		EFB2_03817	0.41	-1.7
3,997,153	-		EFB2_03817	0.41	+0.1
3,997,153	-		EFB2_03817	0.41	-0.1
3,997,153	-		EFB2_03817	0.41	-2.7
3,997,236	+		EFB2_03817	0.57	-0.6
3,997,236	+		EFB2_03817	0.57	-0.2
3,997,236	+		EFB2_03817	0.57	+1.2
3,997,236	+		EFB2_03817	0.57	-2.0
3,997,237	-		EFB2_03817	0.57	-1.1
3,997,237	-		EFB2_03817	0.57	+0.8
3,997,237	-		EFB2_03817	0.57	-2.8
3,997,237	-		EFB2_03817	0.57	+1.7
3,997,237	-		EFB2_03817	0.57	-2.2
3,997,237	-		EFB2_03817	0.57	+0.1
3,997,237	-		EFB2_03817	0.57	+0.7
3,997,237	-		EFB2_03817	0.57	-2.2
3,997,237	-		EFB2_03817	0.57	-0.7
3,997,237	-		EFB2_03817	0.57	-1.2
3,997,238	+		EFB2_03817	0.58	-1.7
3,997,238	+		EFB2_03817	0.58	+1.4
3,997,239	-		EFB2_03817	0.58	-1.8
3,997,276	+		EFB2_03817	0.65	+3.2
3,997,276	+		EFB2_03817	0.65	-1.5
3,997,276	+		EFB2_03817	0.65	+1.8
3,997,277	-		EFB2_03817	0.65	-2.5
3,997,317	+		EFB2_03817	0.73	-0.8
3,997,317	+		EFB2_03817	0.73	+0.7
3,997,317	+		EFB2_03817	0.73	-1.3
3,997,318	-		EFB2_03817	0.73	+2.8
3,997,318	-		EFB2_03817	0.73	-0.6
3,997,319	+		EFB2_03817	0.73	-0.3
3,997,319	+		EFB2_03817	0.73	-2.1
3,997,319	+		EFB2_03817	0.73	-1.7
3,997,319	+		EFB2_03817	0.73	+0.1
3,997,319	+		EFB2_03817	0.73	-0.2
3,997,319	+		EFB2_03817	0.73	+2.2
3,997,319	+		EFB2_03817	0.73	-0.2
3,997,320	-		EFB2_03817	0.73	-0.2
3,997,320	-		EFB2_03817	0.73	-2.7
3,997,320	-		EFB2_03817	0.73	-2.0
3,997,320	-		EFB2_03817	0.73	+2.2
3,997,320	-		EFB2_03817	0.73	+0.0
3,997,388	+		EFB2_03817	0.86	-1.5
3,997,389	-		EFB2_03817	0.86	-1.7
3,997,389	-		EFB2_03817	0.86	-2.2
3,997,550	+				+3.4
3,997,551	-				+0.7
3,997,551	-				-0.2
3,997,551	-				-0.1
3,997,600	+		EFB2_03818	0.10	+1.1
3,997,600	+		EFB2_03818	0.10	-1.4
3,997,601	-		EFB2_03818	0.10	+2.1
3,997,618	+		EFB2_03818	0.12	+1.5
3,997,619	-		EFB2_03818	0.12	+0.1
3,997,619	-		EFB2_03818	0.12	+1.3
3,997,669	+		EFB2_03818	0.15	+0.6
3,997,669	+		EFB2_03818	0.15	-2.7
3,997,670	-		EFB2_03818	0.15	-1.7
3,997,670	-		EFB2_03818	0.15	-1.0
3,997,670	-		EFB2_03818	0.15	-1.8
3,997,670	-		EFB2_03818	0.15	+0.0
3,997,670	-		EFB2_03818	0.15	-0.7
3,997,670	-		EFB2_03818	0.15	-0.8
3,997,686	+		EFB2_03818	0.17	+0.3
3,997,686	+		EFB2_03818	0.17	-0.2
3,997,686	+		EFB2_03818	0.17	+3.8
3,997,686	+		EFB2_03818	0.17	-1.6
3,997,687	-		EFB2_03818	0.17	-1.8
3,997,762	+		EFB2_03818	0.22	-0.9
3,997,762	+		EFB2_03818	0.22	+0.1
3,997,762	+		EFB2_03818	0.22	+0.4
3,997,762	+		EFB2_03818	0.22	+0.7
3,997,762	+		EFB2_03818	0.22	+3.0
3,997,762	+		EFB2_03818	0.22	+1.6
3,997,762	+		EFB2_03818	0.22	+0.4
3,997,762	+		EFB2_03818	0.22	-0.2
3,997,762	+		EFB2_03818	0.22	+0.1
3,997,763	-		EFB2_03818	0.22	-2.2
3,997,763	-		EFB2_03818	0.22	-1.9
3,997,763	-		EFB2_03818	0.22	-1.4
3,997,763	-		EFB2_03818	0.22	-1.0
3,997,763	-		EFB2_03818	0.22	+1.7
3,997,763	-		EFB2_03818	0.22	+0.8
3,997,763	-		EFB2_03818	0.22	+2.6
3,997,763	-		EFB2_03818	0.22	-1.4
3,997,763	-		EFB2_03818	0.22	-1.7
3,997,763	-		EFB2_03818	0.22	-1.5
3,997,763	-		EFB2_03818	0.22	+1.7
3,997,763	-		EFB2_03818	0.22	-0.2
3,997,763	-		EFB2_03818	0.22	-2.2
3,997,763	-		EFB2_03818	0.22	-2.5
3,997,763	-		EFB2_03818	0.22	+0.0
3,997,766	+		EFB2_03818	0.22	-1.7
3,997,766	+		EFB2_03818	0.22	-1.6
3,997,767	-		EFB2_03818	0.23	-0.2
3,997,767	-		EFB2_03818	0.23	-3.0
3,997,785	+		EFB2_03818	0.24	+5.5
3,997,785	+		EFB2_03818	0.24	+2.0
3,997,785	+		EFB2_03818	0.24	+2.6
3,997,785	+		EFB2_03818	0.24	+0.8
3,997,786	-		EFB2_03818	0.24	+0.3
3,997,786	-		EFB2_03818	0.24	-2.0
3,997,932	+		EFB2_03818	0.35	+3.0
3,997,932	+		EFB2_03818	0.35	+0.4
3,997,933	-		EFB2_03818	0.35	-1.1
3,997,933	-		EFB2_03818	0.35	-1.8
3,997,933	-		EFB2_03818	0.35	+2.0
3,997,993	+		EFB2_03818	0.39	-2.5
3,998,032	+		EFB2_03818	0.42	-1.2
3,998,032	+		EFB2_03818	0.42	+0.1
3,998,032	+		EFB2_03818	0.42	+0.8
3,998,179	+		EFB2_03818	0.53	+1.5
3,998,179	+		EFB2_03818	0.53	+0.5
3,998,179	+		EFB2_03818	0.53	-0.7
3,998,179	+		EFB2_03818	0.53	-1.7
3,998,180	-		EFB2_03818	0.53	-1.4
3,998,180	-		EFB2_03818	0.53	+0.3
3,998,180	-		EFB2_03818	0.53	+2.9
3,998,180	-		EFB2_03818	0.53	-2.0
3,998,197	+		EFB2_03818	0.54	+3.3
3,998,261	+		EFB2_03818	0.59	+1.8
3,998,261	+		EFB2_03818	0.59	-1.0
3,998,311	+		EFB2_03818	0.63	-0.9
3,998,311	+		EFB2_03818	0.63	-1.7
3,998,311	+		EFB2_03818	0.63	-1.9
3,998,311	+		EFB2_03818	0.63	+2.7
3,998,312	-		EFB2_03818	0.63	+0.3
3,998,312	-		EFB2_03818	0.63	-1.4
3,998,312	-		EFB2_03818	0.63	+2.3
3,998,339	+		EFB2_03818	0.65	-0.7
3,998,339	+		EFB2_03818	0.65	-0.5
3,998,339	+		EFB2_03818	0.65	-1.2
3,998,339	+		EFB2_03818	0.65	+0.3
3,998,339	+		EFB2_03818	0.65	-0.2
3,998,339	+		EFB2_03818	0.65	-2.7
3,998,340	-		EFB2_03818	0.65	-1.2
3,998,340	-		EFB2_03818	0.65	-2.2
3,998,340	-		EFB2_03818	0.65	+1.3
3,998,340	-		EFB2_03818	0.65	-0.5
3,998,340	-		EFB2_03818	0.65	-1.8
3,998,340	-		EFB2_03818	0.65	-1.0
3,998,340	-		EFB2_03818	0.65	-1.6
3,998,341	+		EFB2_03818	0.65	-1.5
3,998,341	+		EFB2_03818	0.65	-2.8
3,998,341	+		EFB2_03818	0.65	+4.8
3,998,342	-		EFB2_03818	0.65	+0.0
3,998,407	+		EFB2_03818	0.70	+3.7
3,998,412	+		EFB2_03818	0.70	-1.2
3,998,413	-		EFB2_03818	0.71	+0.3