Strain Fitness in Escherichia fergusonii Becca around EFB2_03655

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
3,819,942	+		EFB2_03654	0.54	+0.2
3,820,037	-		EFB2_03654	0.59	+1.2
3,820,078	+		EFB2_03654	0.61	-0.1
3,820,078	+		EFB2_03654	0.61	-2.6
3,820,079	-		EFB2_03654	0.61	-0.9
3,820,079	-		EFB2_03654	0.61	+2.4
3,820,152	+		EFB2_03654	0.65	-0.7
3,820,152	+		EFB2_03654	0.65	-0.4
3,820,152	+		EFB2_03654	0.65	+0.3
3,820,152	+		EFB2_03654	0.65	-1.7
3,820,152	+		EFB2_03654	0.65	+2.1
3,820,152	+		EFB2_03654	0.65	+0.6
3,820,152	+		EFB2_03654	0.65	-1.9
3,820,152	+		EFB2_03654	0.65	+4.5
3,820,152	+		EFB2_03654	0.65	+0.0
3,820,152	+		EFB2_03654	0.65	-0.9
3,820,152	+		EFB2_03654	0.65	-0.7
3,820,152	+		EFB2_03654	0.65	+1.0
3,820,152	+		EFB2_03654	0.65	-1.2
3,820,152	+		EFB2_03654	0.65	-1.7
3,820,152	+		EFB2_03654	0.65	-0.2
3,820,152	+		EFB2_03654	0.65	+0.1
3,820,152	+		EFB2_03654	0.65	+3.5
3,820,152	+		EFB2_03654	0.65	-2.0
3,820,152	+		EFB2_03654	0.65	-0.7
3,820,152	+		EFB2_03654	0.65	-1.6
3,820,153	-		EFB2_03654	0.65	-1.8
3,820,153	-		EFB2_03654	0.65	+1.9
3,820,153	-		EFB2_03654	0.65	+2.4
3,820,153	-		EFB2_03654	0.65	-1.2
3,820,153	-		EFB2_03654	0.65	-0.8
3,820,153	-		EFB2_03654	0.65	-2.1
3,820,153	-		EFB2_03654	0.65	+1.7
3,820,153	-		EFB2_03654	0.65	-1.5
3,820,153	-		EFB2_03654	0.65	-1.0
3,820,153	-		EFB2_03654	0.65	+1.8
3,820,156	+		EFB2_03654	0.65	-1.0
3,820,156	+		EFB2_03654	0.65	-1.7
3,820,156	+		EFB2_03654	0.65	+0.4
3,820,156	+		EFB2_03654	0.65	-0.8
3,820,156	+		EFB2_03654	0.65	-0.5
3,820,156	+		EFB2_03654	0.65	+1.5
3,820,156	+		EFB2_03654	0.65	-1.8
3,820,156	+		EFB2_03654	0.65	-0.3
3,820,156	+		EFB2_03654	0.65	+1.6
3,820,156	+		EFB2_03654	0.65	+4.1
3,820,157	-		EFB2_03654	0.65	+1.1
3,820,157	-		EFB2_03654	0.65	+1.9
3,820,157	-		EFB2_03654	0.65	-2.0
3,820,157	-		EFB2_03654	0.65	+1.9
3,820,157	-		EFB2_03654	0.65	+1.4
3,820,157	-		EFB2_03654	0.65	+3.4
3,820,157	-		EFB2_03654	0.65	-1.3
3,820,157	-		EFB2_03654	0.65	-1.4
3,820,157	-		EFB2_03654	0.65	-1.4
3,820,174	+		EFB2_03654	0.66	+1.3
3,820,174	+		EFB2_03654	0.66	-0.3
3,820,174	+		EFB2_03654	0.66	+2.5
3,820,175	-		EFB2_03654	0.66	-0.8
3,820,191	+		EFB2_03654	0.67	-0.9
3,820,191	+		EFB2_03654	0.67	-1.1
3,820,192	-		EFB2_03654	0.67	-0.6
3,820,192	-		EFB2_03654	0.67	-0.8
3,820,192	-		EFB2_03654	0.67	-1.5
3,820,192	-		EFB2_03654	0.67	-1.5
3,820,192	-		EFB2_03654	0.67	-0.7
3,820,221	+		EFB2_03654	0.69	-0.4
3,820,221	+		EFB2_03654	0.69	-0.6
3,820,222	-		EFB2_03654	0.69	-1.2
3,820,260	+		EFB2_03654	0.71	-0.3
3,820,260	+		EFB2_03654	0.71	+1.0
3,820,260	+		EFB2_03654	0.71	-1.7
3,820,260	+		EFB2_03654	0.71	+0.8
3,820,260	+		EFB2_03654	0.71	+2.6
3,820,260	+		EFB2_03654	0.71	+0.8
3,820,261	-		EFB2_03654	0.71	-1.0
3,820,261	-		EFB2_03654	0.71	+0.9
3,820,261	-		EFB2_03654	0.71	-2.0
3,820,261	-		EFB2_03654	0.71	-0.3
3,820,261	-		EFB2_03654	0.71	-2.0
3,820,313	+		EFB2_03654	0.74	-1.8
3,820,313	+		EFB2_03654	0.74	+0.6
3,820,313	+		EFB2_03654	0.74	+1.1
3,820,313	+		EFB2_03654	0.74	-1.7
3,820,313	+		EFB2_03654	0.74	-0.6
3,820,313	+		EFB2_03654	0.74	+3.4
3,820,314	-		EFB2_03654	0.74	-2.6
3,820,314	-		EFB2_03654	0.74	+1.1
3,820,314	-		EFB2_03654	0.74	+2.6
3,820,314	-		EFB2_03654	0.74	+0.8
3,820,314	-		EFB2_03654	0.74	-0.1
3,820,341	+		EFB2_03654	0.75	-0.0
3,820,341	+		EFB2_03654	0.75	+0.3
3,820,341	+		EFB2_03654	0.75	-1.1
3,820,341	+		EFB2_03654	0.75	-1.2
3,820,341	+		EFB2_03654	0.75	+5.1
3,820,341	+		EFB2_03654	0.75	-0.1
3,820,341	+		EFB2_03654	0.75	-1.6
3,820,341	+		EFB2_03654	0.75	-0.9
3,820,342	-		EFB2_03654	0.76	-0.4
3,820,342	-		EFB2_03654	0.76	-0.1
3,820,344	+		EFB2_03654	0.76	-1.7
3,820,344	+		EFB2_03654	0.76	+1.0
3,820,344	+		EFB2_03654	0.76	-1.3
3,820,344	+		EFB2_03654	0.76	-1.0
3,820,344	+		EFB2_03654	0.76	-0.4
3,820,344	+		EFB2_03654	0.76	+2.4
3,820,344	+		EFB2_03654	0.76	+0.8
3,820,344	+		EFB2_03654	0.76	-1.5
3,820,344	+		EFB2_03654	0.76	+0.9
3,820,344	+		EFB2_03654	0.76	+0.2
3,820,344	+		EFB2_03654	0.76	+0.8
3,820,344	+		EFB2_03654	0.76	+2.3
3,820,344	+		EFB2_03654	0.76	-0.2
3,820,344	+		EFB2_03654	0.76	+2.8
3,820,344	+		EFB2_03654	0.76	+0.9
3,820,344	+		EFB2_03654	0.76	-0.7
3,820,344	+		EFB2_03654	0.76	+0.3
3,820,344	+		EFB2_03654	0.76	-1.1
3,820,344	+		EFB2_03654	0.76	+1.3
3,820,344	+		EFB2_03654	0.76	+0.3
3,820,344	+		EFB2_03654	0.76	-2.0
3,820,344	+		EFB2_03654	0.76	-1.9
3,820,344	+		EFB2_03654	0.76	+3.4
3,820,344	+		EFB2_03654	0.76	-1.4
3,820,344	+		EFB2_03654	0.76	-1.3
3,820,345	-		EFB2_03654	0.76	+0.2
3,820,345	-		EFB2_03654	0.76	-3.4
3,820,345	-		EFB2_03654	0.76	+4.5
3,820,345	-		EFB2_03654	0.76	+2.0
3,820,345	-		EFB2_03654	0.76	+0.1
3,820,345	-		EFB2_03654	0.76	+1.4
3,820,345	-		EFB2_03654	0.76	+1.8
3,820,345	-		EFB2_03654	0.76	-1.7
3,820,345	-		EFB2_03654	0.76	-1.8
3,820,345	-		EFB2_03654	0.76	-2.0
3,820,345	-		EFB2_03654	0.76	+1.4
3,820,345	-		EFB2_03654	0.76	+4.0
3,820,345	-		EFB2_03654	0.76	-2.0
3,820,345	-		EFB2_03654	0.76	-1.6
3,820,448	+		EFB2_03654	0.81	+0.1
3,820,448	+		EFB2_03654	0.81	+6.9
3,820,449	-		EFB2_03654	0.81	-2.2
3,820,449	-		EFB2_03654	0.81	+1.7
3,820,507	+		EFB2_03654	0.85	+2.9
3,820,507	+		EFB2_03654	0.85	-0.4
3,820,507	+		EFB2_03654	0.85	-1.0
3,820,507	+		EFB2_03654	0.85	-1.2
3,820,546	+		EFB2_03654	0.87	+0.6
3,820,546	+		EFB2_03654	0.87	-0.9
3,820,546	+		EFB2_03654	0.87	-0.8
3,820,546	+		EFB2_03654	0.87	+0.3
3,820,546	+		EFB2_03654	0.87	+1.6
3,820,546	+		EFB2_03654	0.87	-2.7
3,820,546	+		EFB2_03654	0.87	+9.2
3,820,546	+		EFB2_03654	0.87	-0.3
3,820,546	+		EFB2_03654	0.87	-1.2
3,820,546	+		EFB2_03654	0.87	+0.6
3,820,546	+		EFB2_03654	0.87	-1.4
3,820,546	+		EFB2_03654	0.87	+0.4
3,820,546	+		EFB2_03654	0.87	-0.1
3,820,546	+		EFB2_03654	0.87	-2.8
3,820,546	+		EFB2_03654	0.87	-0.1
3,820,546	+		EFB2_03654	0.87	-1.3
3,820,546	+		EFB2_03654	0.87	+1.7
3,820,546	+		EFB2_03654	0.87	+3.5
3,820,546	+		EFB2_03654	0.87	-0.5
3,820,547	-		EFB2_03654	0.87	-1.2
3,820,547	-		EFB2_03654	0.87	-0.1
3,820,547	-		EFB2_03654	0.87	+1.2
3,820,547	-		EFB2_03654	0.87	+4.8
3,820,547	-		EFB2_03654	0.87	+1.7
3,820,547	-		EFB2_03654	0.87	+0.1
3,820,547	-		EFB2_03654	0.87	+0.2
3,820,547	-		EFB2_03654	0.87	-0.2
3,820,549	-		EFB2_03654	0.87	-0.9
3,820,630	+				-2.6
3,820,630	+				-0.1
3,820,630	+				+0.4
3,820,630	+				+1.2
3,820,630	+				-1.8
3,820,631	-				+0.9
3,820,631	-				-1.1
3,820,631	-				-1.4
3,820,631	-				-0.5
3,820,670	-				-0.9
3,820,678	+				-1.1
3,820,678	+				+0.5
3,820,678	+				-1.1
3,820,678	+				+2.6
3,820,678	+				-2.6
3,820,679	-				-2.0
3,820,679	-				-1.3
3,820,679	-				+0.8
3,820,679	-				+1.3
3,820,679	-				+2.0
3,820,679	-				-2.2
3,820,679	-				-0.0
3,820,679	-				-0.1
3,820,679	-				+0.4
3,820,679	-				-1.7
3,820,717	+				-0.9
3,820,717	+				+4.4
3,820,717	+				-1.1
3,820,717	+				+0.6
3,820,717	+				-1.8
3,820,717	+				-0.9
3,820,717	+				+2.5
3,820,717	+				-2.3
3,820,717	+				-0.8
3,820,717	+				+1.8
3,820,717	+				-0.6
3,820,717	+				+4.6
3,820,718	-				+0.2
3,820,718	-				+0.3
3,820,718	-				+1.8
3,820,718	-				-1.4
3,820,718	-				-1.0
3,820,718	-				-1.2
3,820,718	-				+1.6
3,820,718	-				+1.1
3,820,778	+				-1.0
3,820,779	-				+1.5
3,820,779	-				-1.8
3,820,779	-				-2.2
3,820,786	+				+3.2
3,820,786	+				-2.0
3,820,786	+				+3.5
3,820,786	+				-0.1
3,820,786	+				-3.1
3,820,786	+				-2.7
3,820,786	+				+0.8
3,820,786	+				-0.8
3,820,786	+				-0.8
3,820,786	+				-0.8
3,820,786	+				-2.9
3,820,786	+				+4.5
3,820,786	+				-3.0
3,820,786	+				-0.9
3,820,787	-				+6.5
3,820,787	-				-0.2
3,820,787	-				-0.5
3,820,787	-				+1.0
3,820,787	-				+1.4
3,820,787	-				-0.8
3,820,787	-				-0.7
3,820,787	-				-1.9
3,820,787	-				+3.9
3,820,787	-				+1.0
3,820,822	+				-0.9
3,820,823	-				+3.6
3,820,827	+				-0.8
3,820,827	+				-1.1
3,820,827	+				-1.2
3,820,827	+				-1.3
3,820,827	+				+0.9
3,820,827	+				+1.9
3,820,827	+				+0.6
3,820,828	-				-0.5
3,820,828	-				-3.7
3,820,828	-				-0.2
3,820,828	-				-1.5
3,820,828	-				-1.1
3,820,828	-				+0.4
3,820,828	-				+4.1
3,820,828	-				-1.6
3,820,828	-				-0.8
3,820,828	-				-1.2
3,820,828	-				-0.2
3,820,828	-				+2.4
3,820,828	-				+3.7
3,820,828	-				-1.2
3,820,828	-				+3.2
3,820,856	+				+0.8
3,820,856	+				+3.8
3,820,856	+				-1.0
3,820,856	+				-1.0
3,820,856	+				+0.4
3,820,857	-				-2.5
3,820,857	-				-0.3
3,820,857	-				-1.5
3,820,857	-				-1.2
3,820,857	-				-0.9
3,820,857	-				-0.9
3,820,884	-				+1.9
3,820,884	-				-0.4
3,820,927	+				-1.8
3,820,927	+				+2.2
3,820,927	+				+3.2
3,820,928	-				-1.7
3,820,944	-				-0.4
3,820,980	+				-0.1
3,820,981	-				-0.2
3,820,981	-				+0.1
3,821,027	+				+1.7
3,821,027	+				+2.2
3,821,027	+				-0.5
3,821,027	+				-1.8
3,821,028	-				+0.3
3,821,028	-				+0.6
3,821,028	-				-0.6
3,821,028	-				+0.2
3,821,028	-				-1.1
3,821,028	-				-0.7
3,821,028	-				-0.9
3,821,028	-				-1.2
3,821,028	-				+1.0
3,821,028	-				-1.4
3,821,028	-				-1.4
3,821,037	+				-0.9
3,821,038	-				-0.6
3,821,038	-				-1.8
3,821,038	-				+1.0
3,821,054	+				-0.9
3,821,073	+				+0.6
3,821,074	-				-1.0
3,821,074	-				+2.0
3,821,074	-				+0.3
3,821,142	+		EFB2_03655	0.15	-0.5
3,821,196	+		EFB2_03655	0.18	-0.5
3,821,196	+		EFB2_03655	0.18	-2.1
3,821,197	-		EFB2_03655	0.19	-0.5
3,821,197	-		EFB2_03655	0.19	+1.6
3,821,197	-		EFB2_03655	0.19	+7.8
3,821,197	-		EFB2_03655	0.19	+0.5
3,821,197	-		EFB2_03655	0.19	+1.5
3,821,197	-		EFB2_03655	0.19	+0.1
3,821,267	+		EFB2_03655	0.24	+0.3
3,821,267	+		EFB2_03655	0.24	-0.8
3,821,267	+		EFB2_03655	0.24	-0.6
3,821,267	+		EFB2_03655	0.24	+3.5
3,821,267	+		EFB2_03655	0.24	+0.6
3,821,267	+		EFB2_03655	0.24	-0.1
3,821,267	+		EFB2_03655	0.24	-0.0
3,821,267	+		EFB2_03655	0.24	-2.0
3,821,267	+		EFB2_03655	0.24	-1.8
3,821,267	+		EFB2_03655	0.24	+4.7
3,821,267	+		EFB2_03655	0.24	+0.1
3,821,267	+		EFB2_03655	0.24	+0.8
3,821,267	+		EFB2_03655	0.24	+0.8
3,821,267	+		EFB2_03655	0.24	+0.2
3,821,267	+		EFB2_03655	0.24	-1.1
3,821,267	+		EFB2_03655	0.24	-0.4
3,821,267	+		EFB2_03655	0.24	-0.5
3,821,267	+		EFB2_03655	0.24	-1.2
3,821,267	+		EFB2_03655	0.24	-0.0
3,821,267	+		EFB2_03655	0.24	-0.6
3,821,267	+		EFB2_03655	0.24	-0.2
3,821,268	-		EFB2_03655	0.24	-0.0
3,821,268	-		EFB2_03655	0.24	-0.5
3,821,268	-		EFB2_03655	0.24	+1.0
3,821,268	-		EFB2_03655	0.24	+1.1
3,821,268	-		EFB2_03655	0.24	-1.7
3,821,268	-		EFB2_03655	0.24	+2.7
3,821,268	-		EFB2_03655	0.24	-0.9
3,821,268	-		EFB2_03655	0.24	-2.2
3,821,268	-		EFB2_03655	0.24	+3.0
3,821,268	-		EFB2_03655	0.24	+1.6
3,821,268	-		EFB2_03655	0.24	-2.8
3,821,268	-		EFB2_03655	0.24	-1.1
3,821,268	-		EFB2_03655	0.24	-2.7
3,821,268	-		EFB2_03655	0.24	-1.6
3,821,276	+		EFB2_03655	0.24	+1.3
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