Strain Fitness in Escherichia fergusonii Becca around EFB2_03409

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
3,562,436	-				+0.7
3,562,436	-				-1.4
3,562,436	-				-0.4
3,562,443	+				+1.4
3,562,443	+				+1.1
3,562,444	-				+0.9
3,562,444	-				-1.1
3,562,444	-				-0.1
3,562,444	-				-0.3
3,562,444	-				+5.0
3,562,444	-				+3.5
3,562,444	-				-1.2
3,562,444	-				-2.3
3,562,444	-				+1.7
3,562,444	-				+0.5
3,562,444	-				-1.9
3,562,444	-				+3.2
3,562,444	-				+1.5
3,562,459	+				+0.7
3,562,460	-				+2.1
3,562,460	-				+1.4
3,562,460	-				+1.1
3,562,460	-				+0.5
3,562,460	-				+2.3
3,562,460	-				-0.6
3,562,460	-				+3.0
3,562,460	-				+2.0
3,562,460	-				-1.6
3,562,460	-				-2.6
3,562,460	-				+4.5
3,562,460	-				+0.9
3,562,460	-				+1.2
3,562,460	-				-1.2
3,562,461	+				-0.2
3,562,461	+				+0.5
3,562,461	+				+0.9
3,562,461	+				+1.1
3,562,461	+				+1.7
3,562,461	+				+0.2
3,562,462	-				+5.6
3,562,462	-				-0.4
3,562,462	-				+4.1
3,562,462	-				+2.9
3,562,462	-				-0.4
3,562,462	-				-1.5
3,562,462	-				+4.6
3,562,462	-				+1.8
3,562,462	-				+4.8
3,562,462	-				+4.1
3,562,462	-				-2.3
3,562,462	-				+4.2
3,562,462	-				-1.6
3,562,462	-				+2.4
3,562,462	-				-1.5
3,562,462	-				+1.0
3,562,462	-				+3.2
3,562,462	-				+1.3
3,562,462	-				+1.5
3,562,462	-				+6.2
3,562,462	-				-1.7
3,562,462	-				-1.3
3,562,462	-				-1.8
3,562,462	-				+1.5
3,562,462	-				-0.5
3,562,462	-				+0.1
3,562,462	-				+3.5
3,562,467	+				+0.5
3,562,468	-				+2.7
3,562,468	-				+2.7
3,562,468	-				-0.6
3,562,468	-				+4.5
3,562,468	-				+6.3
3,562,468	-				+2.2
3,562,518	+				+6.2
3,562,518	+				+3.3
3,562,519	-				-1.8
3,562,519	-				-1.5
3,562,519	-				+3.5
3,562,525	+				+3.5
3,562,525	+				+0.7
3,562,525	+				+7.4
3,562,525	+				+0.5
3,562,525	+				+3.1
3,562,525	+				-0.5
3,562,526	-				+3.5
3,562,526	-				-3.1
3,562,526	-				+2.7
3,562,526	-				+5.0
3,562,526	-				+3.3
3,562,559	+				+6.5
3,562,559	+				+3.0
3,562,559	+				+1.1
3,562,559	+				+5.0
3,562,559	+				+4.2
3,562,559	+				+1.7
3,562,559	+				+1.4
3,562,559	+				+6.1
3,562,559	+				+0.2
3,562,559	+				+2.9
3,562,559	+				+1.9
3,562,559	+				+4.2
3,562,559	+				+2.7
3,562,559	+				+6.5
3,562,559	+				+5.2
3,562,559	+				+9.1
3,562,559	+				-0.1
3,562,559	+				+1.4
3,562,559	+				+0.9
3,562,559	+				+0.5
3,562,559	+				+0.1
3,562,559	+				+4.2
3,562,559	+				+0.8
3,562,559	+				+2.0
3,562,560	-				+0.4
3,562,560	-				+2.1
3,562,560	-				+5.1
3,562,560	-				+4.5
3,562,560	-				+1.7
3,562,560	-				+3.3
3,562,560	-				+1.1
3,562,560	-				-2.9
3,562,560	-				-2.3
3,562,560	-				-1.2
3,562,560	-				+1.5
3,562,560	-				-1.6
3,562,560	-				-1.2
3,562,560	-				-1.2
3,562,560	-				+5.3
3,562,560	-				-2.1
3,562,560	-				-0.7
3,562,560	-				+1.4
3,562,560	-				+1.1
3,562,560	-				+0.6
3,562,560	-				-2.1
3,562,560	-				+4.5
3,562,560	-				+0.9
3,562,560	-				-2.5
3,562,560	-				+2.3
3,562,560	-				+1.5
3,562,560	-				+0.4
3,562,562	+				+5.0
3,562,562	+				+5.5
3,562,562	+				+5.2
3,562,563	-				+0.1
3,562,563	-				+2.4
3,562,563	-				-2.3
3,562,563	-				-2.3
3,562,563	-				+5.3
3,562,563	-				+2.1
3,562,563	-				-1.8
3,562,563	-				+0.5
3,562,563	-				+1.7
3,562,563	-				+0.5
3,562,643	+				+4.9
3,562,643	+				-0.6
3,562,643	+				+0.2
3,562,643	+				-0.5
3,562,643	+				-1.7
3,562,643	+				+0.4
3,562,643	+				+6.8
3,562,643	+				-1.1
3,562,643	+				+1.1
3,562,644	-				-0.9
3,562,644	-				+0.2
3,562,644	-				-2.8
3,562,644	-				+2.7
3,562,644	-				+0.4
3,562,644	-				+0.9
3,562,699	+		EFB2_03408	0.13	-1.5
3,562,699	+		EFB2_03408	0.13	-0.1
3,562,700	-		EFB2_03408	0.13	-1.0
3,562,700	-		EFB2_03408	0.13	-2.3
3,562,718	-		EFB2_03408	0.16	-1.6
3,562,718	-		EFB2_03408	0.16	+1.7
3,562,730	+		EFB2_03408	0.17	+1.1
3,562,730	+		EFB2_03408	0.17	-1.2
3,562,730	+		EFB2_03408	0.17	+1.7
3,562,730	+		EFB2_03408	0.17	+1.3
3,562,730	+		EFB2_03408	0.17	-1.4
3,562,730	+		EFB2_03408	0.17	-2.3
3,562,730	+		EFB2_03408	0.17	-1.6
3,562,730	+		EFB2_03408	0.17	-0.9
3,562,730	+		EFB2_03408	0.17	-0.1
3,562,730	+		EFB2_03408	0.17	+1.0
3,562,730	+		EFB2_03408	0.17	-0.0
3,562,730	+		EFB2_03408	0.17	+1.2
3,562,730	+		EFB2_03408	0.17	+2.0
3,562,731	-		EFB2_03408	0.17	+0.0
3,562,731	-		EFB2_03408	0.17	-1.3
3,562,731	-		EFB2_03408	0.17	-1.1
3,562,731	-		EFB2_03408	0.17	-1.0
3,562,731	-		EFB2_03408	0.17	+0.1
3,562,731	-		EFB2_03408	0.17	+4.8
3,562,731	-		EFB2_03408	0.17	-1.2
3,562,745	+		EFB2_03408	0.19	-1.0
3,562,745	+		EFB2_03408	0.19	-0.8
3,562,745	+		EFB2_03408	0.19	-2.7
3,562,745	+		EFB2_03408	0.19	-2.3
3,562,746	-		EFB2_03408	0.19	-1.7
3,562,746	-		EFB2_03408	0.19	+0.4
3,562,746	-		EFB2_03408	0.19	-0.6
3,562,751	+		EFB2_03408	0.20	+3.3
3,562,751	+		EFB2_03408	0.20	+2.6
3,562,853	+		EFB2_03408	0.33	-1.7
3,562,853	+		EFB2_03408	0.33	-0.7
3,562,854	-		EFB2_03408	0.33	+1.0
3,562,874	+		EFB2_03408	0.36	-1.7
3,562,892	+		EFB2_03408	0.38	-0.0
3,562,892	+		EFB2_03408	0.38	-0.3
3,562,892	+		EFB2_03408	0.38	+2.8
3,562,893	-		EFB2_03408	0.38	-2.7
3,562,893	-		EFB2_03408	0.38	+0.7
3,562,893	-		EFB2_03408	0.38	+2.7
3,562,900	+		EFB2_03408	0.39	-1.9
3,562,953	+		EFB2_03408	0.46	-1.7
3,563,041	+		EFB2_03408	0.58	-2.2
3,563,057	+		EFB2_03408	0.60	+0.3
3,563,057	+		EFB2_03408	0.60	-0.6
3,563,057	+		EFB2_03408	0.60	-1.5
3,563,057	+		EFB2_03408	0.60	+1.4
3,563,057	+		EFB2_03408	0.60	+6.7
3,563,057	+		EFB2_03408	0.60	+1.6
3,563,058	-		EFB2_03408	0.60	-1.4
3,563,058	-		EFB2_03408	0.60	-0.6
3,563,117	+		EFB2_03408	0.68	-1.4
3,563,119	-		EFB2_03408	0.68	-2.0
3,563,128	+		EFB2_03408	0.69	-1.5
3,563,128	+		EFB2_03408	0.69	-1.8
3,563,128	+		EFB2_03408	0.69	-2.2
3,563,128	+		EFB2_03408	0.69	+0.2
3,563,129	-		EFB2_03408	0.69	+3.1
3,563,150	+		EFB2_03408	0.72	-0.5
3,563,150	+		EFB2_03408	0.72	-1.0
3,563,151	-		EFB2_03408	0.72	-1.7
3,563,151	-		EFB2_03408	0.72	-0.1
3,563,189	+		EFB2_03408	0.77	-0.0
3,563,189	+		EFB2_03408	0.77	+1.6
3,563,190	-		EFB2_03408	0.77	+1.8
3,563,190	-		EFB2_03408	0.77	+2.7
3,563,220	+		EFB2_03408	0.81	-1.2
3,563,221	-		EFB2_03408	0.81	-0.1
3,563,221	-		EFB2_03408	0.81	+0.1
3,563,221	-		EFB2_03408	0.81	+6.3
3,563,221	-		EFB2_03408	0.81	-0.0
3,563,235	+		EFB2_03408	0.83	-1.0
3,563,248	+		EFB2_03408	0.85	-0.1
3,563,249	-		EFB2_03408	0.85	+1.7
3,563,249	-		EFB2_03408	0.85	+3.8
3,563,329	+				+1.1
3,563,332	+				-0.5
3,563,332	+				+1.2
3,563,332	+				-0.3
3,563,350	-				+1.7
3,563,374	+				+0.1
3,563,374	+				+1.0
3,563,437	+				-0.9
3,563,437	+				-0.0
3,563,437	+				+3.7
3,563,437	+				-0.9
3,563,437	+				-1.3
3,563,437	+				-1.8
3,563,437	+				+1.6
3,563,437	+				-1.6
3,563,437	+				-1.9
3,563,437	+				+2.0
3,563,437	+				+1.1
3,563,437	+				-0.6
3,563,437	+				-1.2
3,563,437	+				-1.7
3,563,438	-				-0.4
3,563,438	-				-2.4
3,563,438	-				-0.6
3,563,438	-				+0.2
3,563,438	-				-1.1
3,563,438	-				-1.3
3,563,438	-				+2.2
3,563,438	-				-1.6
3,563,438	-				-0.2
3,563,438	-				-0.6
3,563,438	-				-2.9
3,563,438	-				-0.7
3,563,438	-				-1.0
3,563,438	-				+1.1
3,563,438	-				-0.4
3,563,438	-				-1.2
3,563,438	-				-3.1
3,563,438	-				-1.9
3,563,438	-				-2.2
3,563,438	-				-0.1
3,563,438	-				-0.4
3,563,438	-				+3.2
3,563,438	-				+2.5
3,563,438	-				-1.5
3,563,438	-				-1.0
3,563,438	-				-0.5
3,563,438	-				-0.5
3,563,438	-				-1.2
3,563,438	-				-2.4
3,563,438	-				-0.5
3,563,438	-				-0.4
3,563,438	-				-1.1
3,563,440	+				+1.8
3,563,440	+				-1.2
3,563,440	+				-1.3
3,563,440	+				-1.5
3,563,441	-				+0.9
3,563,441	-				-1.9
3,563,441	-				-0.9
3,563,441	-				-1.9
3,563,450	+				+4.5
3,563,526	+		EFB2_03409	0.25	-1.9
3,563,526	+		EFB2_03409	0.25	+0.4
3,563,527	-		EFB2_03409	0.26	+2.1
3,563,534	+		EFB2_03409	0.28	-1.1
3,563,534	+		EFB2_03409	0.28	-0.9
3,563,534	+		EFB2_03409	0.28	-1.6
3,563,534	+		EFB2_03409	0.28	-1.0
3,563,534	+		EFB2_03409	0.28	+0.9
3,563,534	+		EFB2_03409	0.28	+2.8
3,563,534	+		EFB2_03409	0.28	-1.0
3,563,534	+		EFB2_03409	0.28	-1.4
3,563,534	+		EFB2_03409	0.28	-1.2
3,563,534	+		EFB2_03409	0.28	+0.5
3,563,534	+		EFB2_03409	0.28	-1.9
3,563,534	+		EFB2_03409	0.28	-1.1
3,563,534	+		EFB2_03409	0.28	-1.8
3,563,534	+		EFB2_03409	0.28	+0.4
3,563,534	+		EFB2_03409	0.28	+0.9
3,563,535	-		EFB2_03409	0.28	-1.4
3,563,535	-		EFB2_03409	0.28	-0.7
3,563,535	-		EFB2_03409	0.28	-1.3
3,563,535	-		EFB2_03409	0.28	+0.3
3,563,535	-		EFB2_03409	0.28	+2.7
3,563,535	-		EFB2_03409	0.28	+1.7
3,563,535	-		EFB2_03409	0.28	-1.3
3,563,535	-		EFB2_03409	0.28	-1.9
3,563,535	-		EFB2_03409	0.28	-1.4
3,563,535	-		EFB2_03409	0.28	-2.0
3,563,535	-		EFB2_03409	0.28	+0.7
3,563,535	-		EFB2_03409	0.28	-1.3
3,563,535	-		EFB2_03409	0.28	-1.6
3,563,535	-		EFB2_03409	0.28	+0.9
3,563,535	-		EFB2_03409	0.28	-1.0
3,563,535	-		EFB2_03409	0.28	-2.1
3,563,535	-		EFB2_03409	0.28	-1.5
3,563,535	-		EFB2_03409	0.28	-0.6
3,563,535	-		EFB2_03409	0.28	+1.7
3,563,535	-		EFB2_03409	0.28	+3.5
3,563,535	-		EFB2_03409	0.28	+0.5
3,563,535	-		EFB2_03409	0.28	+0.5
3,563,535	-		EFB2_03409	0.28	+0.7
3,563,535	-		EFB2_03409	0.28	-2.5
3,563,535	-		EFB2_03409	0.28	+0.5
3,563,577	+		EFB2_03409	0.39	-3.4
3,563,578	-		EFB2_03409	0.40	+1.7
3,563,607	+		EFB2_03409	0.48	-0.6
3,563,607	+		EFB2_03409	0.48	-1.6
3,563,607	+		EFB2_03409	0.48	-2.1
3,563,607	+		EFB2_03409	0.48	-1.2
3,563,607	+		EFB2_03409	0.48	-1.5
3,563,608	-		EFB2_03409	0.48	-1.0
3,563,608	-		EFB2_03409	0.48	-0.9
3,563,608	-		EFB2_03409	0.48	-1.8
3,563,608	-		EFB2_03409	0.48	-0.0
3,563,608	-		EFB2_03409	0.48	-0.2
3,563,610	+		EFB2_03409	0.48	+1.1
3,563,610	+		EFB2_03409	0.48	+3.3
3,563,610	+		EFB2_03409	0.48	-0.7
3,563,610	+		EFB2_03409	0.48	-2.0
3,563,611	-		EFB2_03409	0.49	-2.5
3,563,611	-		EFB2_03409	0.49	-1.0
3,563,611	-		EFB2_03409	0.49	-0.6
3,563,611	-		EFB2_03409	0.49	+1.9
3,563,611	-		EFB2_03409	0.49	-2.8
3,563,627	+		EFB2_03409	0.53	+0.9
3,563,627	+		EFB2_03409	0.53	-2.3
3,563,642	+		EFB2_03409	0.57	+2.4
3,563,642	+		EFB2_03409	0.57	-1.6
3,563,642	+		EFB2_03409	0.57	-2.4
3,563,642	+		EFB2_03409	0.57	+4.5
3,563,642	+		EFB2_03409	0.57	-1.0
3,563,642	+		EFB2_03409	0.57	+0.8
3,563,642	+		EFB2_03409	0.57	-0.5
3,563,642	+		EFB2_03409	0.57	-0.1
3,563,642	+		EFB2_03409	0.57	-0.9
3,563,642	+		EFB2_03409	0.57	-0.1
3,563,642	+		EFB2_03409	0.57	+0.5
3,563,642	+		EFB2_03409	0.57	-0.0
3,563,642	+		EFB2_03409	0.57	-1.9
3,563,642	+		EFB2_03409	0.57	+0.4
3,563,642	+		EFB2_03409	0.57	+1.5
3,563,642	+		EFB2_03409	0.57	+0.7
3,563,642	+		EFB2_03409	0.57	-2.6
3,563,642	+		EFB2_03409	0.57	-2.1
3,563,642	+		EFB2_03409	0.57	-0.3
3,563,642	+		EFB2_03409	0.57	-2.8
3,563,642	+		EFB2_03409	0.57	-0.7
3,563,642	+		EFB2_03409	0.57	-1.5
3,563,642	+		EFB2_03409	0.57	+0.4
3,563,643	-		EFB2_03409	0.58	+2.1
3,563,643	-		EFB2_03409	0.58	-0.1
3,563,643	-		EFB2_03409	0.58	+0.1
3,563,643	-		EFB2_03409	0.58	-0.3
3,563,643	-		EFB2_03409	0.58	-0.1
3,563,652	+		EFB2_03409	0.60	-1.1
3,563,652	+		EFB2_03409	0.60	-1.7
3,563,653	-		EFB2_03409	0.60	-0.1
3,563,653	-		EFB2_03409	0.60	-2.0
3,563,653	-		EFB2_03409	0.60	-1.1
3,563,653	-		EFB2_03409	0.60	-0.6
3,563,721	+		EFB2_03409	0.79	-1.9
3,563,721	+		EFB2_03409	0.79	+1.7
3,563,721	+		EFB2_03409	0.79	-2.3
3,563,721	+		EFB2_03409	0.79	-2.1
3,563,722	-		EFB2_03409	0.79	-1.2
3,563,753	+		EFB2_03409	0.88	+0.4
3,563,753	+		EFB2_03409	0.88	-1.9
3,563,754	-		EFB2_03409	0.88	-0.0
3,563,754	-		EFB2_03409	0.88	-0.3
3,563,778	+				-2.7
3,563,778	+				-2.0
3,563,795	-				+2.7
3,563,812	+				+0.7
3,563,812	+				+1.9
3,563,812	+				+2.8
3,563,812	+				-1.0
3,563,812	+				+2.1
3,563,812	+				-1.4
3,563,812	+				-1.0
3,563,812	+				+5.0
3,563,812	+				+2.1
3,563,812	+				-1.1
3,563,812	+				-0.3
3,563,812	+				+0.9
3,563,812	+				+3.2
3,563,812	+				+5.4
3,563,812	+				-0.5
3,563,812	+				+0.7
3,563,812	+				-0.3
3,563,812	+				-0.7
3,563,812	+				+1.6
3,563,812	+				-2.1
3,563,812	+				-0.6
3,563,813	-				-1.6
3,563,813	-				-0.1
3,563,813	-				+0.4
3,563,813	-				-2.1
3,563,813	-				-0.6
3,563,813	-				+2.3
3,563,813	-				-1.4
3,563,813	-				-1.1
3,563,813	-				-1.8
3,563,813	-				-0.6
3,563,813	-				+2.1
3,563,813	-				-1.1
3,563,813	-				+2.0
3,563,813	-				-2.2
3,563,813	-				-1.0
3,563,813	-				-0.3
3,563,813	-				+2.7
3,563,867	+				-0.0
3,564,478	+				+2.8
3,564,478	+				+2.4
3,564,478	+				-3.5
3,564,490	+				-2.2
3,564,491	-				-0.3
3,564,501	-				+0.5
3,564,503	+				-1.4
3,564,503	+				+1.4
3,564,504	-				+3.4
3,564,504	-				-0.4
3,564,529	+				-0.6
3,564,554	+				-1.5
3,564,554	+				+0.3
3,564,554	+				+2.1
3,564,554	+				+2.9
3,564,554	+				+1.7
3,564,554	+				-1.4
3,564,554	+				-0.1
3,564,554	+				-1.1
3,564,554	+				+1.6
3,564,554	+				+0.2
3,564,554	+				-2.2
3,564,554	+				+2.0
3,564,554	+				-1.9
3,564,554	+				-2.2
3,564,555	-				+2.7
3,564,555	-				+3.4
3,564,555	-				+2.5
3,564,555	-				+0.9
3,564,560	+				-0.1
3,564,560	+				-0.7
3,564,560	+				+4.7
3,564,560	+				-0.3
3,564,561	-				+0.7
3,564,561	-				-1.6
3,564,561	-				+3.4
3,564,595	+				+5.0
3,564,595	+				+0.3
3,564,595	+				+0.7
3,564,595	+				+0.3
3,564,595	+				-0.3
3,564,595	+				-0.1
3,564,595	+				+0.8
3,564,595	+				+0.5
3,564,595	+				+0.5
3,564,595	+				+1.3
3,564,595	+				+2.0
3,564,595	+				-0.3
3,564,596	-				+2.9
3,564,596	-				-1.0
3,564,596	-				+1.2
3,564,596	-				-0.0
3,564,596	-				-1.3
3,564,596	-				+0.1
3,564,596	-				-0.0
3,564,601	+				+2.4
3,564,601	+				+1.9
3,564,602	-				+0.7
3,564,602	-				+0.3
3,564,602	-				+1.1
3,564,602	-				+1.3
3,564,619	+				+1.6
3,564,619	+				-0.4
3,564,620	-				+0.9
3,564,623	-				+3.0
3,564,628	+				+2.3
3,564,629	-				-1.5
3,564,629	-				+1.7
3,564,656	+				-0.7
3,564,656	+				+0.2
3,564,656	+				+0.1
3,564,656	+				-0.7
3,564,671	+				+5.4
3,564,671	+				+0.5
3,564,672	-				+0.9
3,564,679	+				+1.3