Strain Fitness in Escherichia fergusonii Becca around EFB2_02416

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
2,555,808	-		EFB2_02414	0.62	+0.7
2,555,808	-		EFB2_02414	0.62	+3.5
2,555,808	-		EFB2_02414	0.62	+1.2
2,555,839	+		EFB2_02414	0.64	+2.8
2,555,840	-		EFB2_02414	0.64	-1.1
2,555,840	-		EFB2_02414	0.64	-0.2
2,555,879	+		EFB2_02414	0.67	-0.9
2,555,879	+		EFB2_02414	0.67	+0.5
2,555,879	+		EFB2_02414	0.67	-0.5
2,555,880	-		EFB2_02414	0.67	+2.5
2,555,881	+		EFB2_02414	0.67	-1.2
2,555,881	+		EFB2_02414	0.67	-1.4
2,555,881	+		EFB2_02414	0.67	+3.6
2,555,881	+		EFB2_02414	0.67	-2.1
2,555,881	+		EFB2_02414	0.67	+1.9
2,555,881	+		EFB2_02414	0.67	-1.8
2,555,881	+		EFB2_02414	0.67	-2.2
2,555,881	+		EFB2_02414	0.67	-2.1
2,555,886	+		EFB2_02414	0.67	-1.2
2,555,942	+		EFB2_02414	0.71	+0.5
2,555,955	+		EFB2_02414	0.72	+0.5
2,555,966	+		EFB2_02414	0.72	+1.2
2,555,966	+		EFB2_02414	0.72	+2.9
2,555,966	+		EFB2_02414	0.72	+1.2
2,555,966	+		EFB2_02414	0.72	+2.2
2,555,968	+		EFB2_02414	0.73	-1.2
2,555,968	+		EFB2_02414	0.73	-1.2
2,555,968	+		EFB2_02414	0.73	-1.7
2,555,968	+		EFB2_02414	0.73	+1.9
2,555,968	+		EFB2_02414	0.73	+3.4
2,555,969	-		EFB2_02414	0.73	-0.7
2,555,969	-		EFB2_02414	0.73	+0.2
2,555,969	-		EFB2_02414	0.73	-0.1
2,555,982	+		EFB2_02414	0.74	+0.5
2,555,983	-		EFB2_02414	0.74	+1.9
2,556,120	-		EFB2_02414	0.83	+3.8
2,556,120	-		EFB2_02414	0.83	+3.5
2,556,174	+		EFB2_02414	0.87	+4.2
2,556,174	+		EFB2_02414	0.87	-0.9
2,556,175	-		EFB2_02414	0.87	-1.5
2,556,202	+		EFB2_02414	0.89	+5.2
2,556,203	-		EFB2_02414	0.89	+0.2
2,556,203	-		EFB2_02414	0.89	-1.5
2,556,244	+				+0.5
2,556,244	+				+1.9
2,556,245	-				-0.5
2,556,267	+				+1.5
2,556,277	+				-1.7
2,556,277	+				-2.3
2,556,277	+				+0.2
2,556,277	+				-0.1
2,556,277	+				+0.9
2,556,277	+				-0.4
2,556,278	-				+1.2
2,556,278	-				+1.8
2,556,286	+				+6.2
2,556,308	+				-1.1
2,556,308	+				+0.9
2,556,308	+				+1.9
2,556,308	+				+0.7
2,556,308	+				+0.4
2,556,308	+				-0.4
2,556,308	+				-1.2
2,556,308	+				+4.2
2,556,308	+				+4.6
2,556,308	+				-1.4
2,556,309	-				+5.2
2,556,318	+				-0.5
2,556,322	-				+2.6
2,556,353	+				+0.2
2,556,353	+				-0.3
2,556,354	-				+1.2
2,556,404	+				+4.2
2,556,404	+				+1.9
2,556,404	+				-0.7
2,556,404	+				+1.6
2,556,404	+				-0.5
2,556,405	-				+6.3
2,556,405	-				-2.7
2,556,405	-				+2.5
2,556,405	-				+1.5
2,556,405	-				+1.9
2,556,405	-				+0.5
2,556,405	-				-1.4
2,556,466	+		EFB2_02415	0.31	+3.4
2,556,466	+		EFB2_02415	0.31	+4.8
2,556,467	-		EFB2_02415	0.31	+0.2
2,556,467	-		EFB2_02415	0.31	+0.0
2,556,467	-		EFB2_02415	0.31	+6.1
2,556,467	-		EFB2_02415	0.31	+3.0
2,556,467	-		EFB2_02415	0.31	-0.3
2,556,555	+		EFB2_02415	0.75	+0.7
2,556,556	-		EFB2_02415	0.75	+3.5
2,556,556	-		EFB2_02415	0.75	+2.5
2,556,556	-		EFB2_02415	0.75	-0.3
2,556,589	-				-1.9
2,556,597	-				+2.5
2,556,597	-				+0.5
2,556,606	+				+1.5
2,556,606	+				-1.1
2,556,606	+				+1.2
2,556,607	-				+3.5
2,556,607	-				-0.5
2,556,607	-				-0.4
2,556,607	-				-0.4
2,556,607	-				+0.2
2,556,607	-				+0.0
2,556,607	-				-1.2
2,556,607	-				+0.6
2,556,629	+				+0.0
2,556,658	+				+1.5
2,556,658	+				+1.5
2,556,658	+				+0.2
2,556,659	-				+2.6
2,556,659	-				+4.7
2,556,659	-				+0.0
2,556,660	+				+0.0
2,556,660	+				+3.5
2,556,660	+				+0.9
2,556,660	+				+0.0
2,556,661	-				-1.0
2,556,661	-				-0.6
2,556,661	-				+1.7
2,556,661	-				+0.0
2,556,661	-				-1.5
2,556,661	-				+0.0
2,556,661	-				-0.1
2,556,661	-				-1.4
2,556,661	-				+2.2
2,556,664	+				-2.2
2,556,664	+				+0.5
2,556,664	+				-1.6
2,556,665	-				-1.1
2,556,665	-				+3.1
2,556,682	+				+0.3
2,556,734	+				-0.5
2,556,734	+				-1.0
2,556,734	+				-0.5
2,556,735	-				-0.6
2,556,735	-				+0.7
2,556,735	-				+0.0
2,556,735	-				+0.7
2,556,735	-				-1.3
2,556,735	-				+4.5
2,556,735	-				+3.9
2,556,735	-				+3.4
2,556,735	-				+0.9
2,556,784	+				-1.0
2,556,785	-				-0.7
2,556,785	-				+3.7
2,556,785	-				+0.2
2,556,874	-		EFB2_02416	0.13	+0.7
2,556,912	-		EFB2_02416	0.19	-0.4
2,556,912	-		EFB2_02416	0.19	+0.9
2,556,965	+		EFB2_02416	0.26	+0.2
2,556,966	-		EFB2_02416	0.27	-0.7
2,556,966	-		EFB2_02416	0.27	+3.1
2,556,966	-		EFB2_02416	0.27	+1.5
2,556,966	-		EFB2_02416	0.27	+0.9
2,556,966	-		EFB2_02416	0.27	+0.2
2,556,966	-		EFB2_02416	0.27	+0.7
2,556,967	+		EFB2_02416	0.27	+1.9
2,556,967	+		EFB2_02416	0.27	-0.1
2,556,968	-		EFB2_02416	0.27	-0.1
2,556,968	-		EFB2_02416	0.27	+1.5
2,557,249	+		EFB2_02416	0.68	+1.9
2,557,249	+		EFB2_02416	0.68	+3.5
2,557,250	-		EFB2_02416	0.68	+1.2
2,557,250	-		EFB2_02416	0.68	+4.2
2,557,250	-		EFB2_02416	0.68	-0.8
2,557,250	-		EFB2_02416	0.68	-0.1
2,557,250	-		EFB2_02416	0.68	+2.5
2,557,250	-		EFB2_02416	0.68	+0.3
2,557,250	-		EFB2_02416	0.68	+1.5
2,557,298	+		EFB2_02416	0.75	+2.9
2,557,302	-		EFB2_02416	0.76	-1.7
2,557,302	-		EFB2_02416	0.76	+1.5
2,557,413	-				+1.5
2,557,418	-				-0.8
2,557,448	+				-1.3
2,557,448	+				+0.3
2,557,449	-				-0.1
2,557,449	-				+4.6
2,557,492	+				+1.9
2,557,493	-				-1.0
2,557,493	-				-0.1
2,557,506	+				-0.6
2,557,506	+				+1.2
2,557,506	+				+0.5
2,557,507	-				+1.6
2,557,551	-				+1.8
2,557,560	-				+2.4
2,557,586	+				-0.4
2,557,586	+				+0.3
2,557,586	+				-1.8
2,557,586	+				-0.5
2,557,586	+				-0.4
2,557,587	-				-1.1
2,557,587	-				+1.5
2,557,587	-				-0.1
2,557,623	+				+1.2
2,557,624	-				-1.1
2,557,624	-				+0.8
2,557,696	-		EFB2_02417	0.18	+0.5
2,557,703	+		EFB2_02417	0.19	-1.8
2,557,719	+		EFB2_02417	0.22	+0.5
2,557,720	-		EFB2_02417	0.22	-0.6
2,557,720	-		EFB2_02417	0.22	-1.4
2,557,734	+		EFB2_02417	0.24	+0.5
2,557,873	-		EFB2_02417	0.42	-0.6
2,557,884	-		EFB2_02417	0.44	+0.7
2,557,884	-		EFB2_02417	0.44	+1.4
2,557,914	+		EFB2_02417	0.48	-0.7
2,557,915	-		EFB2_02417	0.48	-1.2
2,557,917	+		EFB2_02417	0.48	-2.2
2,557,917	+		EFB2_02417	0.48	+4.9
2,557,917	+		EFB2_02417	0.48	+0.0
2,557,918	-		EFB2_02417	0.48	-1.4
2,557,918	-		EFB2_02417	0.48	+5.4
2,557,918	-		EFB2_02417	0.48	+1.5
2,557,918	-		EFB2_02417	0.48	-0.3
2,557,918	-		EFB2_02417	0.48	-1.5
2,557,920	+		EFB2_02417	0.48	+0.3
2,557,920	+		EFB2_02417	0.48	+0.0
2,557,921	-		EFB2_02417	0.49	-1.2
2,557,921	-		EFB2_02417	0.49	-1.5
2,557,921	-		EFB2_02417	0.49	+5.1
2,557,932	+		EFB2_02417	0.50	+2.7
2,557,932	+		EFB2_02417	0.50	-0.3
2,557,932	+		EFB2_02417	0.50	+0.2
2,557,933	-		EFB2_02417	0.50	-0.6
2,557,933	-		EFB2_02417	0.50	-1.3
2,557,933	-		EFB2_02417	0.50	+2.3
2,557,933	-		EFB2_02417	0.50	-0.7
2,557,933	-		EFB2_02417	0.50	+1.9
2,557,933	-		EFB2_02417	0.50	+0.7
2,557,933	-		EFB2_02417	0.50	+0.5
2,557,933	-		EFB2_02417	0.50	+1.0
2,557,945	-		EFB2_02417	0.52	-0.6
2,557,968	+		EFB2_02417	0.55	-1.4
2,557,968	+		EFB2_02417	0.55	+0.0
2,557,968	+		EFB2_02417	0.55	+0.3
2,557,968	+		EFB2_02417	0.55	-0.3
2,557,968	+		EFB2_02417	0.55	+3.0
2,557,968	+		EFB2_02417	0.55	+2.6
2,557,968	+		EFB2_02417	0.55	+1.2
2,557,968	+		EFB2_02417	0.55	+0.1
2,557,968	+		EFB2_02417	0.55	-0.3
2,557,968	+		EFB2_02417	0.55	-0.1
2,557,968	+		EFB2_02417	0.55	+0.5
2,557,968	+		EFB2_02417	0.55	+0.7
2,557,968	+		EFB2_02417	0.55	-0.1
2,557,968	+		EFB2_02417	0.55	-0.3
2,557,969	-		EFB2_02417	0.55	+1.6
2,557,969	-		EFB2_02417	0.55	-1.0
2,557,969	-		EFB2_02417	0.55	+2.7
2,557,969	-		EFB2_02417	0.55	-1.0
2,557,969	-		EFB2_02417	0.55	-2.7
2,557,969	-		EFB2_02417	0.55	+1.2
2,557,969	-		EFB2_02417	0.55	-1.1
2,557,969	-		EFB2_02417	0.55	+1.9
2,557,969	-		EFB2_02417	0.55	+1.2
2,557,969	-		EFB2_02417	0.55	-1.2
2,557,969	-		EFB2_02417	0.55	+2.9
2,557,969	-		EFB2_02417	0.55	-2.1
2,557,969	-		EFB2_02417	0.55	-2.1
2,557,970	+		EFB2_02417	0.55	+2.6
2,557,970	+		EFB2_02417	0.55	+1.2
2,557,970	+		EFB2_02417	0.55	+1.6
2,557,970	+		EFB2_02417	0.55	-1.5
2,557,970	+		EFB2_02417	0.55	+2.5
2,557,970	+		EFB2_02417	0.55	-0.6
2,557,970	+		EFB2_02417	0.55	+1.5
2,557,970	+		EFB2_02417	0.55	+2.3
2,557,970	+		EFB2_02417	0.55	-0.5
2,557,970	+		EFB2_02417	0.55	+0.0
2,557,970	+		EFB2_02417	0.55	+1.2
2,557,970	+		EFB2_02417	0.55	+2.6
2,557,970	+		EFB2_02417	0.55	+1.3
2,557,970	+		EFB2_02417	0.55	-1.7
2,557,970	+		EFB2_02417	0.55	-2.2
2,557,970	+		EFB2_02417	0.55	+0.7
2,557,970	+		EFB2_02417	0.55	-1.3
2,557,970	+		EFB2_02417	0.55	+3.3
2,557,970	+		EFB2_02417	0.55	+1.5
2,557,970	+		EFB2_02417	0.55	+2.8
2,557,970	+		EFB2_02417	0.55	-1.0
2,557,970	+		EFB2_02417	0.55	+1.7
2,557,970	+		EFB2_02417	0.55	-1.6
2,557,970	+		EFB2_02417	0.55	+0.6
2,557,970	+		EFB2_02417	0.55	-0.4
2,557,970	+		EFB2_02417	0.55	-1.4
2,557,970	+		EFB2_02417	0.55	+1.4
2,557,970	+		EFB2_02417	0.55	+1.5
2,557,971	-		EFB2_02417	0.55	-0.3
2,557,971	-		EFB2_02417	0.55	+0.8
2,557,971	-		EFB2_02417	0.55	+0.7
2,557,971	-		EFB2_02417	0.55	-0.3
2,557,971	-		EFB2_02417	0.55	-1.2
2,557,971	-		EFB2_02417	0.55	+1.3
2,557,971	-		EFB2_02417	0.55	-2.5
2,557,971	-		EFB2_02417	0.55	-1.5
2,557,971	-		EFB2_02417	0.55	-0.9
2,557,971	-		EFB2_02417	0.55	-0.3
2,557,971	-		EFB2_02417	0.55	-0.8
2,557,971	-		EFB2_02417	0.55	+0.5
2,557,971	-		EFB2_02417	0.55	-0.7
2,557,971	-		EFB2_02417	0.55	-0.1
2,557,971	-		EFB2_02417	0.55	+0.7
2,557,971	-		EFB2_02417	0.55	+2.2
2,557,971	-		EFB2_02417	0.55	+3.2
2,557,971	-		EFB2_02417	0.55	-1.4
2,557,971	-		EFB2_02417	0.55	-1.7
2,557,971	-		EFB2_02417	0.55	+0.0
2,557,971	-		EFB2_02417	0.55	+0.7
2,557,971	-		EFB2_02417	0.55	+0.5
2,557,971	-		EFB2_02417	0.55	+0.9
2,557,971	-		EFB2_02417	0.55	-1.9
2,557,971	-		EFB2_02417	0.55	-1.4
2,557,971	-		EFB2_02417	0.55	-1.4
2,557,971	-		EFB2_02417	0.55	+4.6
2,557,971	-		EFB2_02417	0.55	-0.4
2,557,971	-		EFB2_02417	0.55	+2.3
2,557,971	-		EFB2_02417	0.55	-1.1
2,557,971	-		EFB2_02417	0.55	-0.2
2,557,971	-		EFB2_02417	0.55	+1.8
2,557,971	-		EFB2_02417	0.55	+1.8
2,557,971	-		EFB2_02417	0.55	+1.8
2,557,971	-		EFB2_02417	0.55	-0.6
2,557,972	+		EFB2_02417	0.55	+1.5
2,557,972	+		EFB2_02417	0.55	-0.5
2,557,972	+		EFB2_02417	0.55	+1.2
2,557,972	+		EFB2_02417	0.55	-1.1
2,557,972	+		EFB2_02417	0.55	+1.2
2,557,972	+		EFB2_02417	0.55	+1.9
2,557,972	+		EFB2_02417	0.55	+0.7
2,557,972	+		EFB2_02417	0.55	-0.9
2,557,972	+		EFB2_02417	0.55	+0.0
2,557,972	+		EFB2_02417	0.55	-0.2
2,557,972	+		EFB2_02417	0.55	-0.3
2,557,972	+		EFB2_02417	0.55	+0.3
2,557,972	+		EFB2_02417	0.55	+0.9
2,557,973	-		EFB2_02417	0.56	+1.5
2,557,973	-		EFB2_02417	0.56	-0.3
2,557,973	-		EFB2_02417	0.56	+0.9
2,557,973	-		EFB2_02417	0.56	-1.7
2,557,973	-		EFB2_02417	0.56	+0.3
2,557,973	-		EFB2_02417	0.56	+3.5
2,557,973	-		EFB2_02417	0.56	+1.2
2,557,973	-		EFB2_02417	0.56	+2.3
2,557,973	-		EFB2_02417	0.56	-0.1
2,557,973	-		EFB2_02417	0.56	+1.5
2,557,973	-		EFB2_02417	0.56	-0.1
2,557,973	-		EFB2_02417	0.56	+0.5
2,557,973	-		EFB2_02417	0.56	-0.7
2,557,973	-		EFB2_02417	0.56	+2.0
2,557,973	-		EFB2_02417	0.56	+1.9
2,557,973	-		EFB2_02417	0.56	+0.2
2,557,973	-		EFB2_02417	0.56	-0.3
2,557,973	-		EFB2_02417	0.56	+1.2
2,557,973	-		EFB2_02417	0.56	-0.1
2,557,973	-		EFB2_02417	0.56	+0.5
2,557,973	-		EFB2_02417	0.56	+2.5
2,557,973	-		EFB2_02417	0.56	-0.7
2,557,973	-		EFB2_02417	0.56	-1.0
2,557,992	+		EFB2_02417	0.58	+0.7
2,557,992	+		EFB2_02417	0.58	-1.1
2,557,993	-		EFB2_02417	0.58	-0.3
2,558,069	-		EFB2_02417	0.68	+1.2
2,558,082	+		EFB2_02417	0.70	+0.7
2,558,082	+		EFB2_02417	0.70	+0.9
2,558,082	+		EFB2_02417	0.70	-0.3
2,558,083	-		EFB2_02417	0.70	+0.7
2,558,083	-		EFB2_02417	0.70	+2.5
2,558,083	-		EFB2_02417	0.70	+3.2
2,558,124	+		EFB2_02417	0.76	-0.8
2,558,159	+		EFB2_02417	0.80	+3.6
2,558,159	+		EFB2_02417	0.80	+4.5
2,558,159	+		EFB2_02417	0.80	+4.8
2,558,159	+		EFB2_02417	0.80	+3.1
2,558,160	-		EFB2_02417	0.81	+3.0
2,558,160	-		EFB2_02417	0.81	+5.8
2,558,160	-		EFB2_02417	0.81	+2.2
2,558,160	-		EFB2_02417	0.81	+0.2
2,558,160	-		EFB2_02417	0.81	-0.2
2,558,160	-		EFB2_02417	0.81	-1.4
2,558,160	-		EFB2_02417	0.81	+0.2
2,558,160	-		EFB2_02417	0.81	-0.7
2,558,160	-		EFB2_02417	0.81	-0.7
2,558,160	-		EFB2_02417	0.81	+4.5
2,558,160	-		EFB2_02417	0.81	-0.8
2,558,160	-		EFB2_02417	0.81	+0.2
2,558,160	-		EFB2_02417	0.81	+0.8
2,558,160	-		EFB2_02417	0.81	-0.4
2,558,160	-		EFB2_02417	0.81	+4.7
2,558,166	+		EFB2_02417	0.81	+1.2
2,558,166	+		EFB2_02417	0.81	+0.2
2,558,167	-		EFB2_02417	0.82	+0.3
2,558,167	-		EFB2_02417	0.82	-2.3
2,558,167	-		EFB2_02417	0.82	-0.5
2,558,229	+		EFB2_02417	0.90	+1.5
2,558,293	+				+0.9
2,558,294	-				-1.4
2,558,294	-				-1.2
2,558,336	+				-1.0
2,558,341	+				+3.5
2,558,341	+				-1.0
2,558,342	-				-1.8
2,558,355	+				+5.6
2,558,355	+				-2.0
2,558,355	+				-0.4
2,558,356	-				+0.3
2,558,356	-				-1.9
2,558,356	-				+0.2
2,558,356	-				-0.8
2,558,356	-				+2.2
2,558,365	+				-1.7
2,558,368	+				+0.9
2,558,369	-				-0.9
2,558,401	-				-1.0
2,558,401	-				+3.5
2,558,406	+				-0.2
2,558,406	+				-0.3
2,558,407	-				-1.6
2,558,407	-				+0.7
2,558,407	-				-0.8
2,558,407	-				-0.3
2,558,407	-				-0.2
2,558,412	-				+0.3