Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4803

Experiment: Ying_all64 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 1
1,814,752	+		GFF4802	0.23	+0.4
1,814,753	-		GFF4802	0.23	+0.0
1,814,815	+		GFF4802	0.28	-0.3
1,814,815	+		GFF4802	0.28	-0.1
1,814,815	+		GFF4802	0.28	+0.4
1,814,816	-		GFF4802	0.28	-0.3
1,814,816	-		GFF4802	0.28	-0.2
1,814,816	-		GFF4802	0.28	+0.7
1,814,816	-		GFF4802	0.28	-1.0
1,814,816	-		GFF4802	0.28	-0.3
1,815,004	+		GFF4802	0.45	-0.2
1,815,004	+		GFF4802	0.45	-1.9
1,815,055	+		GFF4802	0.49	+0.1
1,815,124	+		GFF4802	0.55	+0.0
1,815,125	-		GFF4802	0.55	+0.1
1,815,386	-		GFF4802	0.78	+0.2
1,815,386	-		GFF4802	0.78	-0.5
1,815,407	-		GFF4802	0.80	+0.3
1,815,475	+		GFF4802	0.86	+0.6
1,815,476	-		GFF4802	0.86	-0.6
1,815,476	-		GFF4802	0.86	+0.1
1,815,476	-		GFF4802	0.86	-0.1
1,815,476	-		GFF4802	0.86	+0.5
1,815,478	+		GFF4802	0.86	+0.2
1,815,479	-		GFF4802	0.86	+0.6
1,815,479	-		GFF4802	0.86	-0.2
1,815,911	+		GFF4803	0.24	-1.3
1,816,082	+		GFF4803	0.48	-1.0
1,816,083	-		GFF4803	0.48	-0.2
1,816,268	+		GFF4803	0.74	-0.7
1,816,269	-		GFF4803	0.74	-1.6
1,816,488	+				-0.2
1,816,515	+				-0.1
1,816,515	+				-1.0
1,816,515	+				-0.7
1,816,515	+				+0.0
1,816,515	+				-0.5
1,816,515	+				+0.5
1,816,516	-				-0.4
1,816,919	-		GFF4804	0.28	+0.0
1,816,919	-		GFF4804	0.28	+1.0
1,817,017	+		GFF4804	0.35	+0.3
1,817,104	+		GFF4804	0.41	-0.1
1,817,104	+		GFF4804	0.41	+0.6
1,817,105	-		GFF4804	0.41	-0.1
1,817,146	+		GFF4804	0.44	+0.2
1,817,146	+		GFF4804	0.44	-0.0
1,817,413	+		GFF4804	0.63	-0.2
1,817,413	+		GFF4804	0.63	-0.0
1,817,413	+		GFF4804	0.63	-1.0
1,817,413	+		GFF4804	0.63	-0.9
1,817,413	+		GFF4804	0.63	+0.9
1,817,414	-		GFF4804	0.64	+0.1
1,817,414	-		GFF4804	0.64	+0.0
1,817,414	-		GFF4804	0.64	-0.5
1,817,414	-		GFF4804	0.64	+0.1
1,817,419	+		GFF4804	0.64	-0.3
1,817,420	-		GFF4804	0.64	+0.0