Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4748

Experiment: Ying_all64 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 1
1,729,781	+				+0.3
1,729,782	-				-0.7
1,729,782	-				+0.5
1,729,925	+		GFF4747	0.13	+0.0
1,729,925	+		GFF4747	0.13	+0.9
1,729,925	+		GFF4747	0.13	-0.1
1,729,925	+		GFF4747	0.13	-0.6
1,729,926	-		GFF4747	0.13	+0.8
1,729,926	-		GFF4747	0.13	+0.3
1,729,978	-		GFF4747	0.19	+0.1
1,729,982	-		GFF4747	0.20	-0.4
1,730,000	+		GFF4747	0.22	-0.2
1,730,000	+		GFF4747	0.22	-0.9
1,730,001	-		GFF4747	0.22	-0.9
1,730,050	+		GFF4747	0.27	+0.1
1,730,051	-		GFF4747	0.27	+0.8
1,730,051	-		GFF4747	0.27	+0.5
1,730,158	+		GFF4747	0.39	+0.2
1,730,159	-		GFF4747	0.39	+0.3
1,730,159	-		GFF4747	0.39	-0.5
1,730,212	+		GFF4747	0.45	+1.1
1,730,212	+		GFF4747	0.45	-0.2
1,730,213	-		GFF4747	0.46	-0.1
1,730,246	-		GFF4747	0.49	-0.8
1,730,575	+		GFF4747	0.86	+0.0
1,730,606	-		GFF4747	0.89	-0.1
1,730,897	+		GFF4748	0.20	+0.2
1,730,898	-		GFF4748	0.20	-0.1
1,730,898	-		GFF4748	0.20	+1.4
1,731,075	-		GFF4748	0.40	-0.4
1,731,128	+		GFF4748	0.46	-0.6
1,731,128	+		GFF4748	0.46	+0.0
1,731,128	+		GFF4748	0.46	-0.2
1,731,128	+		GFF4748	0.46	-0.2
1,731,128	+		GFF4748	0.46	-0.1
1,731,129	-		GFF4748	0.46	-0.2
1,731,129	-		GFF4748	0.46	-0.5
1,731,805	+				-0.4
1,732,252	+				+0.1
1,732,253	-				-0.1