Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4613

Experiment: Ying_all64 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 1
1,558,869	+		GFF4612	0.33	+0.3
1,558,913	+		GFF4612	0.37	-0.9
1,558,913	+		GFF4612	0.37	+0.1
1,558,914	-		GFF4612	0.37	-0.1
1,558,914	-		GFF4612	0.37	+1.8
1,559,096	+		GFF4612	0.53	+0.3
1,559,096	+		GFF4612	0.53	-1.3
1,559,096	+		GFF4612	0.53	-0.2
1,559,096	+		GFF4612	0.53	-0.0
1,559,097	-		GFF4612	0.53	-0.1
1,559,097	-		GFF4612	0.53	+0.1
1,559,097	-		GFF4612	0.53	+1.6
1,559,097	-		GFF4612	0.53	-0.1
1,559,098	+		GFF4612	0.53	+1.0
1,559,264	+		GFF4612	0.67	-0.5
1,559,264	+		GFF4612	0.67	-0.3
1,559,265	-		GFF4612	0.67	+0.6
1,559,343	+		GFF4612	0.74	+0.1
1,559,576	+				-0.1
1,559,576	+				-0.2
1,559,576	+				+0.4
1,559,576	+				+0.8
1,559,576	+				+0.1
1,559,576	+				+0.9
1,559,576	+				+0.1
1,559,576	+				+0.1
1,559,576	+				+0.4
1,559,576	+				-0.3
1,559,577	-				-0.0
1,559,577	-				-0.1
1,559,577	-				+0.3
1,559,577	-				-2.6
1,559,577	-				-0.3
1,559,577	-				-0.0
1,559,577	-				-0.2
1,559,577	-				-0.3
1,559,577	-				+0.2
1,559,577	-				-0.1
1,559,577	-				-0.9
1,559,577	-				-0.3
1,559,577	-				-0.1
1,559,675	+				-0.0
1,559,675	+				-0.4
1,559,675	+				-0.4
1,559,675	+				+0.1
1,559,675	+				+0.1
1,559,676	-				-0.6
1,559,676	-				-0.0
1,559,750	+				+0.3
1,559,751	-				-0.1
1,559,843	+		GFF4613	0.10	-0.6
1,559,843	+		GFF4613	0.10	-0.5
1,559,843	+		GFF4613	0.10	+0.3
1,559,843	+		GFF4613	0.10	+0.3
1,559,844	-		GFF4613	0.10	+0.2
1,559,866	+		GFF4613	0.13	+0.7
1,559,866	+		GFF4613	0.13	+0.2
1,559,867	-		GFF4613	0.13	+0.4
1,559,893	+		GFF4613	0.16	+0.1
1,559,893	+		GFF4613	0.16	+0.2
1,559,893	+		GFF4613	0.16	+0.1
1,559,893	+		GFF4613	0.16	+0.0
1,559,894	-		GFF4613	0.17	-0.1
1,559,894	-		GFF4613	0.17	-0.1
1,559,897	+		GFF4613	0.17	-0.3
1,559,897	+		GFF4613	0.17	+0.0
1,559,897	+		GFF4613	0.17	-0.6
1,559,898	-		GFF4613	0.17	+0.3
1,559,898	-		GFF4613	0.17	+0.0
1,559,962	+		GFF4613	0.25	+0.5
1,559,963	-		GFF4613	0.26	+0.9
1,560,267	-		GFF4613	0.65	+0.3
1,560,304	+		GFF4613	0.70	-0.1
1,560,305	-		GFF4613	0.70	-0.2
1,560,336	-		GFF4613	0.74	+0.0
1,560,446	-		GFF4613	0.88	+0.2
1,560,446	-		GFF4613	0.88	+0.3
1,560,581	+				-0.0
1,560,581	+				-0.6
1,560,582	-				-0.1
1,560,582	-				+0.4
1,560,582	-				-0.2
1,560,617	+				-0.1
1,560,617	+				-0.2
1,560,618	-				-1.3
1,560,618	-				+0.1
1,560,998	+		GFF4614	0.41	+0.0
1,560,999	-		GFF4614	0.41	-0.3
1,560,999	-		GFF4614	0.41	+0.3
1,561,002	+		GFF4614	0.41	-1.2
1,561,002	+		GFF4614	0.41	-0.5
1,561,002	+		GFF4614	0.41	-0.1
1,561,002	+		GFF4614	0.41	-1.1
1,561,003	-		GFF4614	0.41	-0.4
1,561,008	+		GFF4614	0.42	+0.4
1,561,009	-		GFF4614	0.42	-0.1
1,561,009	-		GFF4614	0.42	-0.4
1,561,024	+		GFF4614	0.43	-0.3
1,561,025	-		GFF4614	0.43	+0.5
1,561,392	-		GFF4614	0.76	-0.1
1,561,430	+		GFF4614	0.79	+0.8
1,561,431	-		GFF4614	0.79	-0.3
1,561,476	+		GFF4614	0.83	-0.5
1,561,476	+		GFF4614	0.83	+0.6
1,561,477	-		GFF4614	0.83	-0.1
1,561,477	-		GFF4614	0.83	+0.4