Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4571

Experiment: Ying_all64 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 1
1,514,067	-		GFF4570	0.54	-0.4
1,514,190	-		GFF4570	0.61	+0.2
1,514,213	+		GFF4570	0.62	+1.0
1,514,213	+		GFF4570	0.62	+0.2
1,514,214	-		GFF4570	0.62	-0.7
1,514,214	-		GFF4570	0.62	+0.1
1,514,228	+		GFF4570	0.63	-0.3
1,514,228	+		GFF4570	0.63	+0.0
1,514,363	+		GFF4570	0.69	+1.1
1,514,364	-		GFF4570	0.69	-0.2
1,514,364	-		GFF4570	0.69	-0.2
1,514,432	+		GFF4570	0.73	-0.3
1,514,432	+		GFF4570	0.73	+1.1
1,514,432	+		GFF4570	0.73	-0.3
1,514,432	+		GFF4570	0.73	-0.5
1,514,433	-		GFF4570	0.73	+0.5
1,514,433	-		GFF4570	0.73	+1.6
1,514,448	-		GFF4570	0.74	-0.3
1,514,448	-		GFF4570	0.74	-0.3
1,514,705	+		GFF4570	0.87	-0.4
1,514,705	+		GFF4570	0.87	-0.9
1,514,774	+				-0.2
1,514,774	+				-0.2
1,514,774	+				-0.2
1,514,775	-				+1.0
1,514,876	+				-0.6
1,514,876	+				-0.1
1,514,876	+				-0.3
1,514,877	-				-1.4
1,514,877	-				+0.2
1,515,010	+				-0.2
1,515,285	+		GFF4571	0.34	-2.0
1,515,285	+		GFF4571	0.34	+0.2
1,515,286	-		GFF4571	0.34	-1.0
1,515,286	-		GFF4571	0.34	-0.3
1,515,286	-		GFF4571	0.34	-0.7
1,515,360	+		GFF4571	0.44	+0.4
1,515,360	+		GFF4571	0.44	+0.1
1,515,360	+		GFF4571	0.44	+0.4
1,515,559	-		GFF4571	0.70	-0.0
1,515,559	-		GFF4571	0.70	-0.1
1,515,559	-		GFF4571	0.70	+3.0
1,515,559	-		GFF4571	0.70	-1.0
1,515,906	-		GFF4572	0.15	+1.0
1,515,907	+		GFF4572	0.15	+0.1
1,516,102	+		GFF4572	0.42	+0.0
1,516,102	+		GFF4572	0.42	-0.2
1,516,103	-		GFF4572	0.42	-0.5
1,516,103	-		GFF4572	0.42	-0.1
1,516,103	-		GFF4572	0.42	+0.4
1,516,103	-		GFF4572	0.42	+0.0
1,516,103	-		GFF4572	0.42	-0.6
1,516,315	+		GFF4572	0.70	+0.4
1,516,315	+		GFF4572	0.70	+0.2
1,516,316	-		GFF4572	0.71	-1.2
1,516,316	-		GFF4572	0.71	+0.5
1,516,316	-		GFF4572	0.71	-0.0
1,516,316	-		GFF4572	0.71	-0.1
1,516,471	+				+0.6
1,516,471	+				+0.4
1,516,471	+				+0.5
1,516,471	+				-0.5
1,516,472	-				+0.3
1,516,472	-				+0.5
1,516,472	-				-0.2
1,516,474	+				-0.2
1,516,475	-				-0.2
1,516,475	-				-0.2
1,516,475	-				+0.5
1,516,475	-				-0.1
1,516,475	-				-0.8