Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1695

Experiment: Ying_all64 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 1
545,570	+				+0.6
545,571	-				-1.9
545,943	+		GFF1695	0.35	-1.7
545,943	+		GFF1695	0.35	-0.7
545,944	-		GFF1695	0.35	+0.3
545,944	-		GFF1695	0.35	-0.0
545,944	-		GFF1695	0.35	+0.3
546,160	+		GFF1695	0.62	+1.1
546,161	-		GFF1695	0.62	-0.1
546,161	-		GFF1695	0.62	+2.1
546,161	-		GFF1695	0.62	-0.1
546,161	-		GFF1695	0.62	+1.5
546,161	-		GFF1695	0.62	-0.2
546,277	-		GFF1695	0.77	+0.6
546,384	+				+0.4
546,384	+				+0.8
546,385	-				-1.1
546,572	+				-0.2
546,573	-				+0.2
546,899	+		GFF1696	0.35	+0.3
546,899	+		GFF1696	0.35	-0.2
547,190	+		GFF1696	0.58	+0.1
547,191	-		GFF1696	0.58	+0.3