Strain Fitness in Escherichia coli ECRC101 around MCAODC_23935

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
1,511,459	+	pgaB	MCAODC_23930	0.58	-1.4
1,511,459	+	pgaB	MCAODC_23930	0.58	-0.3
1,511,538	-	pgaB	MCAODC_23930	0.62	+0.9
1,511,639	+	pgaB	MCAODC_23930	0.67	+1.8
1,511,639	+	pgaB	MCAODC_23930	0.67	-0.2
1,511,678	+	pgaB	MCAODC_23930	0.69	+0.3
1,511,710	+	pgaB	MCAODC_23930	0.70	-0.3
1,512,337	-				-1.2
1,512,360	+				+1.8
1,512,524	-	pgaC	MCAODC_23935	0.17	+0.8
1,512,532	+	pgaC	MCAODC_23935	0.17	+0.8
1,512,827	+	pgaC	MCAODC_23935	0.39	-0.7
1,512,829	+	pgaC	MCAODC_23935	0.40	+0.4
1,512,829	+	pgaC	MCAODC_23935	0.40	-2.6
1,512,848	+	pgaC	MCAODC_23935	0.41	+0.1
1,512,901	+	pgaC	MCAODC_23935	0.45	-0.6
1,512,984	+	pgaC	MCAODC_23935	0.51	+1.4
1,513,081	+	pgaC	MCAODC_23935	0.59	+1.3
1,513,082	-	pgaC	MCAODC_23935	0.59	+1.8
1,513,143	+	pgaC	MCAODC_23935	0.63	+0.2
1,513,280	+	pgaC	MCAODC_23935	0.74	+0.8
1,513,378	+	pgaC	MCAODC_23935	0.81	+1.0
1,513,631	+				-0.7
1,513,686	+	pgaD	MCAODC_23940	0.13	-1.4
1,513,687	-	pgaD	MCAODC_23940	0.13	-0.2
1,513,928	-	pgaD	MCAODC_23940	0.71	+1.8
1,513,934	-	pgaD	MCAODC_23940	0.73	+0.8
1,514,005	+				+1.5
1,514,005	+				+1.2
1,514,087	+				+0.8
1,514,090	+				+1.1
1,514,091	-				-0.7
1,514,091	-				+1.5
1,514,096	+				+0.8
1,514,096	+				-1.4
1,514,097	-				+0.8
1,514,103	-				-1.6
1,514,103	-				+0.8
1,514,115	+				+3.8
1,514,116	-				+0.2
1,514,209	+	phoH	MCAODC_23945	0.11	+1.8
1,514,210	-	phoH	MCAODC_23945	0.11	-0.6
1,514,364	+	phoH	MCAODC_23945	0.25	+0.3
1,514,378	+	phoH	MCAODC_23945	0.27	-1.2
1,514,379	-	phoH	MCAODC_23945	0.27	+0.4
1,514,407	+	phoH	MCAODC_23945	0.29	+0.4
1,514,483	+	phoH	MCAODC_23945	0.36	+0.2
1,514,515	+	phoH	MCAODC_23945	0.39	-1.8
1,514,580	+	phoH	MCAODC_23945	0.46	+0.8
1,514,580	+	phoH	MCAODC_23945	0.46	+1.8
1,514,581	-	phoH	MCAODC_23945	0.46	+1.8
1,514,581	-	phoH	MCAODC_23945	0.46	-2.2
1,514,584	+	phoH	MCAODC_23945	0.46	-0.8
1,514,584	+	phoH	MCAODC_23945	0.46	+1.4
1,514,584	+	phoH	MCAODC_23945	0.46	-0.2