Strain Fitness in Escherichia coli ECRC101 around MCAODC_11885

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
2,348,479	-	grcA	MCAODC_11875	0.42	-1.3
2,348,494	+	grcA	MCAODC_11875	0.46	+1.9
2,348,579	+	grcA	MCAODC_11875	0.68	+0.2
2,348,579	+	grcA	MCAODC_11875	0.68	-2.7
2,348,618	-	grcA	MCAODC_11875	0.78	-0.2
2,348,625	+	grcA	MCAODC_11875	0.80	-1.3
2,348,639	+	grcA	MCAODC_11875	0.83	+1.5
2,348,681	+				-0.1
2,348,682	-				-1.8
2,348,707	+				+0.3
2,348,708	-				+0.3
2,348,711	+				+0.5
2,348,711	+				+0.5
2,348,711	+				-0.7
2,348,711	+				-1.4
2,348,712	-				-0.3
2,348,712	-				+1.0
2,348,719	+				+1.6
2,348,719	+				-3.4
2,348,720	-				+0.6
2,348,720	-				-0.1
2,348,720	-				-1.0
2,348,762	+				-0.7
2,348,763	-				-0.3
2,348,783	+				+1.0
2,348,784	-				-0.1
2,348,813	-				-0.6
2,348,826	-	eamB	MCAODC_11880	0.12	+0.6
2,348,921	-	eamB	MCAODC_11880	0.28	-1.2
2,348,979	-	eamB	MCAODC_11880	0.38	-2.2
2,348,979	-	eamB	MCAODC_11880	0.38	-0.0
2,349,099	+	eamB	MCAODC_11880	0.58	-2.8
2,349,099	+	eamB	MCAODC_11880	0.58	-0.9
2,349,099	+	eamB	MCAODC_11880	0.58	-0.8
2,349,099	+	eamB	MCAODC_11880	0.58	+0.3
2,349,099	+	eamB	MCAODC_11880	0.58	-0.1
2,349,100	-	eamB	MCAODC_11880	0.58	-0.7
2,349,100	-	eamB	MCAODC_11880	0.58	+1.5
2,349,100	-	eamB	MCAODC_11880	0.58	+0.7
2,349,100	-	eamB	MCAODC_11880	0.58	-1.1
2,349,100	-	eamB	MCAODC_11880	0.58	-0.2
2,349,100	-	eamB	MCAODC_11880	0.58	-0.1
2,349,100	-	eamB	MCAODC_11880	0.58	+0.9
2,349,101	+	eamB	MCAODC_11880	0.58	-1.3
2,349,101	+	eamB	MCAODC_11880	0.58	-0.4
2,349,101	+	eamB	MCAODC_11880	0.58	+0.1
2,349,101	+	eamB	MCAODC_11880	0.58	+0.2
2,349,102	-	eamB	MCAODC_11880	0.59	-1.7
2,349,102	-	eamB	MCAODC_11880	0.59	-1.4
2,349,102	-	eamB	MCAODC_11880	0.59	+0.3
2,349,261	+	eamB	MCAODC_11880	0.86	+1.7
2,349,273	+	eamB	MCAODC_11880	0.88	+0.3
2,349,274	-	eamB	MCAODC_11880	0.88	+1.7
2,349,274	-	eamB	MCAODC_11880	0.88	+0.5
2,349,311	+				-0.4
2,349,311	+				-0.2
2,349,328	+				+0.4
2,349,328	+				+1.5
2,349,329	-				+1.5
2,349,350	+				+2.3
2,349,350	+				-1.5
2,349,350	+				+0.5
2,349,388	+				+0.3
2,349,417	+				-0.1
2,349,447	+				+1.7
2,349,466	-				+1.5
2,349,469	-				+0.1
2,349,474	+				-1.5
2,349,552	+	yfiE	MCAODC_11885	0.12	+0.8
2,349,587	+	yfiE	MCAODC_11885	0.16	+0.3
2,349,587	+	yfiE	MCAODC_11885	0.16	+0.9
2,349,588	-	yfiE	MCAODC_11885	0.16	+1.2
2,349,588	-	yfiE	MCAODC_11885	0.16	+0.1
2,349,588	-	yfiE	MCAODC_11885	0.16	-1.1
2,349,652	+	yfiE	MCAODC_11885	0.23	+1.0
2,349,652	+	yfiE	MCAODC_11885	0.23	+0.2
2,349,652	+	yfiE	MCAODC_11885	0.23	+0.1
2,349,652	+	yfiE	MCAODC_11885	0.23	-1.5
2,349,652	+	yfiE	MCAODC_11885	0.23	+0.9
2,349,653	-	yfiE	MCAODC_11885	0.23	+0.7
2,349,676	-	yfiE	MCAODC_11885	0.26	-0.9
2,349,723	-	yfiE	MCAODC_11885	0.31	+1.5
2,349,723	-	yfiE	MCAODC_11885	0.31	+0.5
2,349,832	+	yfiE	MCAODC_11885	0.44	+0.7
2,349,996	+	yfiE	MCAODC_11885	0.62	+0.7
2,349,997	-	yfiE	MCAODC_11885	0.62	+0.3
2,350,034	+	yfiE	MCAODC_11885	0.66	+0.7
2,350,035	-	yfiE	MCAODC_11885	0.67	+0.5
2,350,117	-	yfiE	MCAODC_11885	0.76	-0.1
2,350,154	-	yfiE	MCAODC_11885	0.80	-1.5
2,350,154	-	yfiE	MCAODC_11885	0.80	-1.3
2,350,236	+	yfiE	MCAODC_11885	0.89	-0.1
2,350,293	+				+1.5
2,350,333	+				-0.5
2,350,364	-				-1.4
2,350,364	-				+1.1
2,350,364	-				+0.1
2,350,416	-				+1.0
2,350,504	-	srmB	MCAODC_11890	0.11	-0.7
2,350,573	-	srmB	MCAODC_11890	0.16	-0.8
2,350,583	+	srmB	MCAODC_11890	0.17	-0.5
2,350,583	+	srmB	MCAODC_11890	0.17	+0.2
2,350,584	-	srmB	MCAODC_11890	0.17	-0.7
2,350,584	-	srmB	MCAODC_11890	0.17	+1.5
2,350,642	-	srmB	MCAODC_11890	0.21	+1.5
2,350,642	-	srmB	MCAODC_11890	0.21	-0.1
2,350,702	+	srmB	MCAODC_11890	0.25	-1.8
2,350,702	+	srmB	MCAODC_11890	0.25	-0.8
2,350,929	-	srmB	MCAODC_11890	0.42	-0.5
2,350,994	+	srmB	MCAODC_11890	0.47	-0.1
2,350,995	-	srmB	MCAODC_11890	0.47	-0.8
2,351,021	-	srmB	MCAODC_11890	0.49	+0.5
2,351,177	+	srmB	MCAODC_11890	0.61	-0.1
2,351,178	-	srmB	MCAODC_11890	0.61	-1.2
2,351,178	-	srmB	MCAODC_11890	0.61	-2.0
2,351,274	+	srmB	MCAODC_11890	0.68	+0.5
2,351,275	-	srmB	MCAODC_11890	0.68	+1.5
2,351,278	+	srmB	MCAODC_11890	0.69	-1.3
2,351,278	+	srmB	MCAODC_11890	0.69	+1.2
2,351,279	-	srmB	MCAODC_11890	0.69	+0.5
2,351,279	-	srmB	MCAODC_11890	0.69	+0.7
2,351,279	-	srmB	MCAODC_11890	0.69	+0.5