Strain Fitness in Escherichia coli ECRC101 around MCAODC_07365

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
1,487,233	+				+0.6
1,487,234	-				+1.0
1,487,261	+				+0.5
1,487,261	+				+0.0
1,487,291	+				-0.6
1,487,292	-				+1.5
1,487,292	-				+0.5
1,487,292	-				+0.9
1,487,292	-				-0.4
1,487,302	+				+1.0
1,487,302	+				+0.3
1,487,303	-				-0.9
1,487,303	-				-2.4
1,487,361	+				-0.5
1,487,361	+				-0.6
1,487,362	-				+0.5
1,487,380	+	yhhW	MCAODC_07360	0.12	+1.5
1,487,398	-	yhhW	MCAODC_07360	0.15	+0.5
1,487,425	-	yhhW	MCAODC_07360	0.19	-0.2
1,487,472	+	yhhW	MCAODC_07360	0.25	-0.5
1,487,479	-	yhhW	MCAODC_07360	0.26	+0.5
1,487,494	+	yhhW	MCAODC_07360	0.28	+0.3
1,487,494	+	yhhW	MCAODC_07360	0.28	-0.1
1,487,494	+	yhhW	MCAODC_07360	0.28	-0.7
1,487,494	+	yhhW	MCAODC_07360	0.28	-0.5
1,487,494	+	yhhW	MCAODC_07360	0.28	-0.3
1,487,495	-	yhhW	MCAODC_07360	0.29	-1.3
1,487,508	+	yhhW	MCAODC_07360	0.30	-1.1
1,487,509	-	yhhW	MCAODC_07360	0.31	-1.3
1,487,509	-	yhhW	MCAODC_07360	0.31	-0.1
1,487,605	+	yhhW	MCAODC_07360	0.44	-1.3
1,487,605	+	yhhW	MCAODC_07360	0.44	-0.8
1,487,605	+	yhhW	MCAODC_07360	0.44	-2.9
1,487,606	-	yhhW	MCAODC_07360	0.45	-0.8
1,487,606	-	yhhW	MCAODC_07360	0.45	+0.5
1,487,606	-	yhhW	MCAODC_07360	0.45	+0.1
1,487,673	+	yhhW	MCAODC_07360	0.54	-1.1
1,487,966	+				-0.3
1,487,967	-				-0.5
1,488,061	-				-0.3
1,488,087	+				-0.6
1,488,112	-				-0.7
1,488,116	+				+0.1
1,488,116	+				-0.6
1,488,116	+				-1.8
1,488,116	+				+0.2
1,488,117	-				+0.5
1,488,117	-				-0.1
1,488,117	-				-0.9
1,488,117	-				+1.2
1,488,119	-				-0.1
1,488,119	-				+0.6
1,488,119	-				+0.6
1,488,122	+				+0.5
1,488,122	+				+0.4
1,488,122	+				-1.1
1,488,123	-				+0.8
1,488,123	-				+0.6
1,488,123	-				-0.6
1,488,126	-				-1.8
1,488,126	-				-0.1
1,488,126	-				-1.6
1,488,131	+				-0.7
1,488,132	-				+1.2
1,488,132	-				-1.2
1,488,132	-				-0.3
1,488,177	-				+0.2
1,488,181	+				-0.6
1,488,181	+				-0.3
1,488,191	+				-0.3
1,488,191	+				+0.0
1,488,192	-				+0.8
1,488,192	-				-0.1
1,488,202	+				+1.3
1,488,202	+				-1.4
1,488,203	-				-0.8
1,488,235	-				+0.9
1,488,258	+				-0.4
1,488,258	+				+0.3
1,488,259	-				-2.2
1,488,359	+	gntR	MCAODC_07365	0.14	-2.2
1,488,359	+	gntR	MCAODC_07365	0.14	-1.6
1,488,360	-	gntR	MCAODC_07365	0.15	-0.3
1,488,362	-	gntR	MCAODC_07365	0.15	-0.7
1,488,391	+	gntR	MCAODC_07365	0.18	+0.4
1,488,456	+	gntR	MCAODC_07365	0.24	-0.8
1,488,457	-	gntR	MCAODC_07365	0.24	-0.8
1,488,516	-	gntR	MCAODC_07365	0.30	+0.7
1,488,516	-	gntR	MCAODC_07365	0.30	+0.5
1,488,522	-	gntR	MCAODC_07365	0.31	-0.1
1,488,618	+	gntR	MCAODC_07365	0.40	+0.2
1,488,619	-	gntR	MCAODC_07365	0.41	-0.2
1,488,793	+	gntR	MCAODC_07365	0.58	-0.3
1,488,793	+	gntR	MCAODC_07365	0.58	-0.5
1,488,794	-	gntR	MCAODC_07365	0.58	-0.5
1,488,794	-	gntR	MCAODC_07365	0.58	-0.4
1,488,794	-	gntR	MCAODC_07365	0.58	+0.4
1,488,794	-	gntR	MCAODC_07365	0.58	+0.1
1,488,796	+	gntR	MCAODC_07365	0.58	+0.3
1,488,796	+	gntR	MCAODC_07365	0.58	+0.0
1,488,796	+	gntR	MCAODC_07365	0.58	+1.2
1,488,796	+	gntR	MCAODC_07365	0.58	-1.6
1,488,797	-	gntR	MCAODC_07365	0.58	-1.1
1,488,797	-	gntR	MCAODC_07365	0.58	-1.8
1,488,797	-	gntR	MCAODC_07365	0.58	-1.2
1,488,851	+	gntR	MCAODC_07365	0.64	+0.9
1,488,852	-	gntR	MCAODC_07365	0.64	+0.5
1,488,852	-	gntR	MCAODC_07365	0.64	-0.5
1,488,853	+	gntR	MCAODC_07365	0.64	-0.6
1,488,853	+	gntR	MCAODC_07365	0.64	+0.1
1,488,854	-	gntR	MCAODC_07365	0.64	-0.2
1,488,854	-	gntR	MCAODC_07365	0.64	+0.1
1,488,854	-	gntR	MCAODC_07365	0.64	-0.2
1,488,854	-	gntR	MCAODC_07365	0.64	+0.5
1,488,854	-	gntR	MCAODC_07365	0.64	-2.1
1,488,882	-	gntR	MCAODC_07365	0.67	+0.8
1,488,950	-	gntR	MCAODC_07365	0.74	+0.2
1,488,952	+	gntR	MCAODC_07365	0.74	+1.0
1,488,953	-	gntR	MCAODC_07365	0.74	-1.6
1,488,953	-	gntR	MCAODC_07365	0.74	-0.5
1,488,953	-	gntR	MCAODC_07365	0.74	-0.2
1,489,002	+	gntR	MCAODC_07365	0.79	-1.8
1,489,019	-	gntR	MCAODC_07365	0.81	-0.9
1,489,170	+				-0.7
1,489,176	+				-0.4
1,489,176	+				+1.5
1,489,177	-				+0.1
1,489,205	-				-2.3
1,489,205	-				+1.0
1,489,205	-				-1.1
1,489,205	-				-0.3
1,489,208	+				+0.2
1,489,208	+				+0.1
1,489,208	+				-0.3
1,489,238	+				-1.5
1,489,238	+				+1.5
1,489,239	-				-0.6
1,489,239	-				-0.1
1,489,239	-				-0.7
1,489,241	-				-1.9
1,489,246	+				-0.6
1,489,246	+				-0.4
1,489,294	+				+0.5
1,489,332	-				-0.6
1,489,360	+				-0.6
1,489,379	+				+0.4
1,489,379	+				+0.2
1,489,379	+				-1.9
1,489,380	-				-0.5
1,489,490	-	gntK	MCAODC_07370	0.27	-1.3
1,489,573	+	gntK	MCAODC_07370	0.42	-0.4
1,489,585	+	gntK	MCAODC_07370	0.45	+0.5
1,489,588	+	gntK	MCAODC_07370	0.45	-0.7
1,489,588	+	gntK	MCAODC_07370	0.45	+0.1
1,489,589	-	gntK	MCAODC_07370	0.45	+1.5
1,489,674	-	gntK	MCAODC_07370	0.62	+0.5
1,489,674	-	gntK	MCAODC_07370	0.62	-0.3
1,489,800	+	gntK	MCAODC_07370	0.85	-1.3
1,489,800	+	gntK	MCAODC_07370	0.85	+0.0
1,489,800	+	gntK	MCAODC_07370	0.85	-1.1
1,489,801	-	gntK	MCAODC_07370	0.86	-1.1
1,489,859	-				-0.6
1,489,859	-				-0.1
1,489,861	+				+3.1
1,489,874	+				-0.9
1,489,874	+				-0.2
1,489,874	+				-1.1
1,489,875	-				+0.9
1,489,875	-				+0.2
1,489,875	-				+0.9
1,489,878	+				-0.7
1,489,879	-				-0.2
1,489,879	-				-0.8
1,489,879	-				+0.3
1,489,885	+				-1.9
1,489,885	+				-1.0
1,489,885	+				-1.3
1,489,886	-				+0.3
1,489,912	-				-2.3
1,489,954	+				+0.9
1,489,954	+				-1.1
1,489,954	+				+0.2
1,489,954	+				+0.4
1,489,955	-				+0.1
1,489,955	-				-0.5
1,489,955	-				-0.5
1,489,955	-				-1.1
1,490,098	+	gntU	MCAODC_07375	0.16	-0.2
1,490,098	+	gntU	MCAODC_07375	0.16	-0.6
1,490,098	+	gntU	MCAODC_07375	0.16	-0.1
1,490,098	+	gntU	MCAODC_07375	0.16	-1.3
1,490,099	-	gntU	MCAODC_07375	0.16	-0.5
1,490,099	-	gntU	MCAODC_07375	0.16	+1.5
1,490,099	-	gntU	MCAODC_07375	0.16	+0.7
1,490,099	-	gntU	MCAODC_07375	0.16	-0.3
1,490,115	+	gntU	MCAODC_07375	0.18	-1.3
1,490,116	-	gntU	MCAODC_07375	0.18	-0.7
1,490,116	-	gntU	MCAODC_07375	0.18	-1.2
1,490,116	-	gntU	MCAODC_07375	0.18	+0.9
1,490,116	-	gntU	MCAODC_07375	0.18	+0.1
1,490,158	+	gntU	MCAODC_07375	0.21	-0.5
1,490,158	+	gntU	MCAODC_07375	0.21	-0.2
1,490,187	-	gntU	MCAODC_07375	0.23	+0.6