Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5270

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
2,283,314	-		GFF5269	0.49	-0.9
2,283,314	-		GFF5269	0.49	+0.6
2,283,791	-		GFF5269	0.80	-0.9
2,283,791	-		GFF5269	0.80	-0.3
2,284,140	+				-0.3
2,284,140	+				+0.6
2,284,141	-				-0.1
2,284,141	-				-1.8
2,284,148	+				+0.4
2,284,375	-		GFF5270	0.23	-0.2
2,284,375	-		GFF5270	0.23	-1.8
2,284,709	+		GFF5270	0.56	-0.1
2,284,979	+		GFF5270	0.82	-0.3
2,285,123	+				-0.1
2,285,124	-				+0.2
2,285,124	-				+0.7
2,285,426	-		GFF5271	0.23	-0.2
2,285,480	-		GFF5271	0.33	+0.1
2,285,731	+		GFF5271	0.80	+0.1
2,285,732	-		GFF5271	0.80	+1.1
2,285,749	+		GFF5271	0.83	-0.9
2,285,749	+		GFF5271	0.83	-0.7
2,285,750	-		GFF5271	0.83	+1.0
2,285,872	-				-0.3