Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5125

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
2,135,280	+		GFF5124	0.68	+0.5
2,135,280	+		GFF5124	0.68	+0.3
2,135,280	+		GFF5124	0.68	+1.0
2,135,280	+		GFF5124	0.68	+0.9
2,135,280	+		GFF5124	0.68	-0.5
2,135,281	-		GFF5124	0.68	-1.1
2,135,281	-		GFF5124	0.68	+0.2
2,135,281	-		GFF5124	0.68	-0.2
2,135,281	-		GFF5124	0.68	-1.4
2,135,766	+				-1.2
2,135,767	-				-0.3
2,136,064	+				+0.2
2,136,064	+				-0.1
2,136,616	+		GFF5125	0.47	+0.3
2,136,616	+		GFF5125	0.47	+0.9
2,136,617	-		GFF5125	0.47	-0.8
2,136,816	-		GFF5125	0.65	-0.8
2,136,880	+		GFF5125	0.70	+1.0
2,136,883	-		GFF5125	0.71	+0.4
2,136,899	-		GFF5125	0.72	+0.0
2,137,024	+		GFF5125	0.83	+0.5
2,137,025	-		GFF5125	0.84	-0.9
2,137,025	-		GFF5125	0.84	+0.8
2,137,025	-		GFF5125	0.84	-0.1
2,137,249	+				-0.0
2,137,249	+				+0.2
2,137,249	+				+0.4
2,137,250	-				-0.3
2,137,250	-				+0.3
2,137,250	-				-0.2
2,137,279	+				-0.8
2,137,471	+		GFF5126	0.33	-0.2
2,137,471	+		GFF5126	0.33	-0.2
2,137,472	-		GFF5126	0.33	-0.3
2,137,539	+		GFF5126	0.42	-0.4
2,137,539	+		GFF5126	0.42	-0.1
2,137,539	+		GFF5126	0.42	-1.0
2,137,539	+		GFF5126	0.42	+0.1
2,137,539	+		GFF5126	0.42	-0.6
2,137,540	-		GFF5126	0.42	-1.0
2,137,540	-		GFF5126	0.42	-1.3
2,137,540	-		GFF5126	0.42	+1.0
2,137,548	-		GFF5126	0.43	+0.2
2,137,668	-		GFF5126	0.58	+0.3
2,137,668	-		GFF5126	0.58	+0.2
2,138,173	-				+0.1