Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF480

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
143,235	+		GFF479	0.35	-0.5
143,235	+		GFF479	0.35	+0.1
143,329	-		GFF479	0.46	+0.6
144,545	-		GFF480	0.44	+0.1
144,911	-		GFF480	0.68	-1.6
144,931	+		GFF480	0.69	-0.7
144,932	-		GFF480	0.69	-0.9
144,932	-		GFF480	0.69	-0.2
144,932	-		GFF480	0.69	-0.2
145,061	-		GFF480	0.77	-0.1
145,412	-				-0.7
145,507	+				-0.1
145,508	-				-0.1
145,652	-		GFF481	0.16	-0.9
145,652	-		GFF481	0.16	+0.8
145,657	+		GFF481	0.17	-1.6
145,657	+		GFF481	0.17	+0.1
146,111	-		GFF481	0.56	+1.8
146,173	+		GFF481	0.61	+0.7
146,372	-		GFF481	0.78	-0.2
146,390	-		GFF481	0.79	-0.5