Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4125

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
1,036,844	-				-0.3
1,036,999	-		GFF4125	0.10	-0.3
1,036,999	-		GFF4125	0.10	-0.1
1,036,999	-		GFF4125	0.10	-0.9
1,037,232	+		GFF4125	0.59	-0.5
1,037,232	+		GFF4125	0.59	-1.3
1,037,232	+		GFF4125	0.59	-0.6
1,037,232	+		GFF4125	0.59	-0.5
1,037,233	-		GFF4125	0.59	+1.4
1,037,233	-		GFF4125	0.59	+0.3
1,037,233	-		GFF4125	0.59	-0.2
1,037,895	+				+0.1
1,037,895	+				-1.0
1,037,896	-				-0.4
1,037,967	-				+0.2
1,038,255	-				-0.5
1,038,270	+				+0.2
1,038,277	-				-1.3