Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF369

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
30,690	-				+0.5
30,690	-				+0.1
30,734	+				-1.2
30,734	+				+0.5
30,735	-				+0.3
30,735	-				-0.6
30,735	-				-0.3
30,744	+				+0.2
30,922	+		GFF368	0.10	-0.1
31,108	+		GFF368	0.48	-1.8
31,108	+		GFF368	0.48	+0.1
31,603	-		GFF369	0.19	+0.4
31,603	-		GFF369	0.19	-0.4
32,103	+		GFF369	0.59	-0.1
32,103	+		GFF369	0.59	+1.0
32,103	+		GFF369	0.59	+0.7
32,104	-		GFF369	0.59	-0.2
32,104	-		GFF369	0.59	+0.1
32,121	+		GFF369	0.60	+0.6
32,122	-		GFF369	0.60	-1.6
32,419	-		GFF369	0.84	-2.3
32,508	+				-0.4
33,136	+		GFF370	0.33	+0.1
33,136	+		GFF370	0.33	-0.0
33,137	-		GFF370	0.33	+0.9
33,137	-		GFF370	0.33	-0.5
33,319	+		GFF370	0.45	-0.4
33,430	+		GFF370	0.52	-1.1
33,430	+		GFF370	0.52	-0.4
33,430	+		GFF370	0.52	+0.2
33,431	-		GFF370	0.52	-0.9
33,431	-		GFF370	0.52	-0.1
33,431	-		GFF370	0.52	-1.9
33,431	-		GFF370	0.52	-0.7
33,487	+		GFF370	0.56	+0.3
33,496	+		GFF370	0.57	-0.9
33,496	+		GFF370	0.57	+0.3
33,497	-		GFF370	0.57	-0.1
33,497	-		GFF370	0.57	-1.0
33,547	+		GFF370	0.60	-0.4
33,548	-		GFF370	0.60	-2.5
33,572	-		GFF370	0.62	-0.1