Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF361

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
22,445	+		GFF359	0.85	-1.1
22,445	+		GFF359	0.85	-0.3
22,446	-		GFF359	0.85	+0.2
22,488	+				-0.2
22,488	+				-0.5
22,488	+				-0.0
22,489	-				+1.5
22,545	+				-1.4
22,545	+				-0.5
22,545	+				+2.1
22,545	+				-0.1
22,546	-				-2.3
22,546	-				-0.4
22,546	-				+1.3
22,546	-				-0.3
22,734	+		GFF360	0.30	-1.1
22,734	+		GFF360	0.30	-0.8
22,735	-		GFF360	0.30	+0.8
22,735	-		GFF360	0.30	-1.3
22,737	+		GFF360	0.30	+0.4
22,737	+		GFF360	0.30	-0.2
22,752	+		GFF360	0.32	-0.1
22,753	-		GFF360	0.32	+0.9
23,013	+		GFF360	0.64	+0.7
23,013	+		GFF360	0.64	+0.1
23,014	-		GFF360	0.64	+0.6
23,082	+		GFF360	0.72	+0.5
23,082	+		GFF360	0.72	+1.5
23,082	+		GFF360	0.72	+0.7
23,082	+		GFF360	0.72	+0.1
23,082	+		GFF360	0.72	-0.1
23,083	-		GFF360	0.73	+0.4
23,083	-		GFF360	0.73	-0.6
23,083	-		GFF360	0.73	-0.5
23,442	+		GFF361	0.14	+0.8
23,943	+		GFF361	0.67	+0.0
23,943	+		GFF361	0.67	+0.6
23,944	-		GFF361	0.68	+1.9
24,296	-				+1.0