Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3063

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
141,776	-				-0.2
142,327	+		GFF3062	0.55	-0.1
142,637	-		GFF3062	0.88	-0.8
144,550	-		GFF3064	0.17	+0.7
144,550	-		GFF3064	0.17	-0.9
144,912	+		GFF3064	0.68	+0.6
144,912	+		GFF3064	0.68	-0.4
144,913	-		GFF3064	0.68	-0.2
144,913	-		GFF3064	0.68	-0.4
145,032	+		GFF3064	0.85	-0.8
145,032	+		GFF3064	0.85	-0.2
145,408	+		GFF3065	0.30	-0.3
145,408	+		GFF3065	0.30	+0.3