Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2208

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
1,096,470	-		GFF2207	0.77	+0.9
1,096,673	+				+0.4
1,096,953	+		GFF2208	0.12	-0.7
1,097,464	-		GFF2208	0.47	-0.1
1,097,472	+		GFF2208	0.48	-3.1
1,097,473	-		GFF2208	0.48	-0.4
1,097,914	-		GFF2208	0.78	-0.9
1,098,072	+		GFF2208	0.89	-0.7
1,098,072	+		GFF2208	0.89	+0.1
1,098,072	+		GFF2208	0.89	+0.3
1,098,073	-		GFF2208	0.89	-0.1
1,098,073	-		GFF2208	0.89	+0.0
1,098,126	+				-0.1
1,098,462	-		GFF2209	0.23	-0.1
1,098,603	-		GFF2209	0.37	-1.4
1,098,645	-		GFF2209	0.41	+0.4
1,098,905	-		GFF2209	0.67	+0.7