Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2110

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
998,705	+		GFF2109	0.71	+1.1
998,705	+		GFF2109	0.71	+1.2
998,747	+		GFF2109	0.73	+0.4
998,748	-		GFF2109	0.73	-0.6
998,954	+		GFF2109	0.82	-0.1
999,210	-				-3.4
999,210	-				+0.0
999,278	+				-1.7
999,279	-				+0.4
999,844	+		GFF2110	0.63	+0.4
1,000,558	+		GFF2111	0.51	-0.0
1,000,558	+		GFF2111	0.51	-0.1
1,000,558	+		GFF2111	0.51	+0.2
1,000,559	-		GFF2111	0.51	-0.3
1,000,559	-		GFF2111	0.51	-0.0
1,000,559	-		GFF2111	0.51	+0.1
1,000,559	-		GFF2111	0.51	-1.1
1,001,063	+		GFF2112	0.13	+0.3
1,001,063	+		GFF2112	0.13	-0.1
1,001,063	+		GFF2112	0.13	+0.9