Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF167

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
180,914	-		GFF166	0.74	-0.4
180,959	-		GFF166	0.76	-0.1
180,959	-		GFF166	0.76	-0.3
181,252	+				-0.1
181,252	+				-0.3
181,252	+				-0.9
181,557	-				+0.4
181,644	+				+0.9
181,644	+				-0.0
181,645	-				-0.0
181,687	-				+0.9
181,687	-				-0.7
182,053	+		GFF167	0.57	-0.7
182,054	-		GFF167	0.57	-0.1
182,171	-		GFF167	0.79	+0.1
182,561	+		GFF168	0.12	+0.4
182,561	+		GFF168	0.12	-0.3
182,562	-		GFF168	0.12	-0.2
182,562	-		GFF168	0.12	-0.6
182,954	+		GFF168	0.32	-0.4
182,954	+		GFF168	0.32	+0.4
182,955	-		GFF168	0.32	+0.5
182,987	+		GFF168	0.33	-1.0
183,104	+		GFF168	0.39	+0.6
183,104	+		GFF168	0.39	-2.3
183,150	-		GFF168	0.41	-0.5