Strain Fitness in Escherichia fergusonii Becca around EFB2_03276

Experiment: BHIS no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control
3,424,365	-				-1.6
3,424,365	-				+0.7
3,424,387	+				+0.6
3,424,387	+				-1.9
3,424,388	-				+0.3
3,424,388	-				-0.6
3,424,388	-				+0.3
3,424,388	-				-1.9
3,424,388	-				+1.2
3,424,388	-				+0.1
3,424,391	+				+0.7
3,424,391	+				-1.1
3,424,392	-				-1.6
3,424,392	-				-0.2
3,424,392	-				+0.5
3,424,392	-				+0.5
3,424,403	+				-2.7
3,424,403	+				+1.4
3,424,403	+				+0.8
3,424,403	+				-0.5
3,424,403	+				-1.1
3,424,403	+				-0.3
3,424,403	+				+0.8
3,424,403	+				+1.2
3,424,403	+				-1.7
3,424,403	+				+0.0
3,424,403	+				+1.8
3,424,403	+				-0.6
3,424,403	+				-1.9
3,424,403	+				+0.8
3,424,404	-				-1.9
3,424,404	-				+0.4
3,424,404	-				-0.9
3,424,404	-				+0.2
3,424,404	-				-1.1
3,424,404	-				+0.2
3,424,404	-				+0.6
3,424,404	-				+0.8
3,424,404	-				+0.6
3,424,404	-				-0.6
3,424,404	-				+1.1
3,424,404	-				-0.5
3,424,404	-				-0.1
3,424,404	-				+1.5
3,424,404	-				-3.8
3,424,404	-				+1.0
3,424,404	-				-0.4
3,424,404	-				-0.5
3,424,404	-				+1.2
3,424,409	+				-1.1
3,424,409	+				+2.6
3,424,409	+				-0.1
3,424,410	-				-0.8
3,424,410	-				+0.1
3,424,410	-				-0.8
3,424,410	-				+0.4
3,424,410	-				+0.2
3,424,410	-				-0.0
3,424,410	-				-0.8
3,424,410	-				+0.3
3,424,426	-				+1.3
3,424,436	+				-0.2
3,424,436	+				-2.9
3,424,437	-				+2.4
3,424,453	+				-0.7
3,424,454	-				-0.3
3,424,461	+				-1.0
3,424,461	+				-2.0
3,424,462	-				-0.2
3,424,467	+				-0.3
3,424,467	+				+0.6
3,424,467	+				-1.1
3,424,468	-				+0.8
3,424,541	-		EFB2_03275	0.15	+1.3
3,424,541	-		EFB2_03275	0.15	-0.2
3,424,597	+		EFB2_03275	0.21	-2.1
3,424,612	+		EFB2_03275	0.23	+0.6
3,424,612	+		EFB2_03275	0.23	-1.9
3,424,612	+		EFB2_03275	0.23	-1.6
3,424,612	+		EFB2_03275	0.23	-0.5
3,424,612	+		EFB2_03275	0.23	-0.3
3,424,612	+		EFB2_03275	0.23	+0.4
3,424,613	-		EFB2_03275	0.23	+0.9
3,424,613	-		EFB2_03275	0.23	-1.6
3,424,613	-		EFB2_03275	0.23	-2.8
3,424,613	-		EFB2_03275	0.23	-2.5
3,424,613	-		EFB2_03275	0.23	-1.0
3,424,613	-		EFB2_03275	0.23	+0.4
3,424,630	+		EFB2_03275	0.25	+0.4
3,424,705	-		EFB2_03275	0.33	-0.9
3,424,710	+		EFB2_03275	0.33	-0.4
3,424,710	+		EFB2_03275	0.33	-0.6
3,424,710	+		EFB2_03275	0.33	+0.4
3,424,710	+		EFB2_03275	0.33	+0.2
3,424,710	+		EFB2_03275	0.33	-1.0
3,424,710	+		EFB2_03275	0.33	+0.4
3,424,710	+		EFB2_03275	0.33	-1.2
3,424,710	+		EFB2_03275	0.33	-0.3
3,424,710	+		EFB2_03275	0.33	-2.7
3,424,710	+		EFB2_03275	0.33	+0.0
3,424,710	+		EFB2_03275	0.33	+0.7
3,424,710	+		EFB2_03275	0.33	+0.7
3,424,711	-		EFB2_03275	0.34	-1.1
3,424,711	-		EFB2_03275	0.34	-0.8
3,424,711	-		EFB2_03275	0.34	+1.9
3,424,711	-		EFB2_03275	0.34	+0.9
3,424,711	-		EFB2_03275	0.34	+0.5
3,424,711	-		EFB2_03275	0.34	+0.9
3,424,712	+		EFB2_03275	0.34	+0.1
3,424,712	+		EFB2_03275	0.34	+0.8
3,424,712	+		EFB2_03275	0.34	+1.5
3,424,712	+		EFB2_03275	0.34	-0.6
3,424,712	+		EFB2_03275	0.34	+2.3
3,424,712	+		EFB2_03275	0.34	+0.2
3,424,712	+		EFB2_03275	0.34	+0.3
3,424,712	+		EFB2_03275	0.34	-1.2
3,424,712	+		EFB2_03275	0.34	-0.2
3,424,712	+		EFB2_03275	0.34	+0.8
3,424,712	+		EFB2_03275	0.34	-0.3
3,424,712	+		EFB2_03275	0.34	-0.8
3,424,712	+		EFB2_03275	0.34	-0.2
3,424,713	-		EFB2_03275	0.34	-1.9
3,424,713	-		EFB2_03275	0.34	-0.9
3,424,713	-		EFB2_03275	0.34	+0.4
3,424,713	-		EFB2_03275	0.34	-1.4
3,424,713	-		EFB2_03275	0.34	-2.3
3,424,713	-		EFB2_03275	0.34	-0.4
3,424,713	-		EFB2_03275	0.34	+0.6
3,424,713	-		EFB2_03275	0.34	+0.2
3,424,713	-		EFB2_03275	0.34	-0.1
3,424,713	-		EFB2_03275	0.34	+0.4
3,424,713	-		EFB2_03275	0.34	-0.1
3,424,713	-		EFB2_03275	0.34	-1.8
3,424,713	-		EFB2_03275	0.34	-1.3
3,424,713	-		EFB2_03275	0.34	+0.5
3,424,713	-		EFB2_03275	0.34	-2.1
3,424,713	-		EFB2_03275	0.34	+1.0
3,424,713	-		EFB2_03275	0.34	-0.5
3,424,713	-		EFB2_03275	0.34	-0.7
3,424,724	-		EFB2_03275	0.35	-2.9
3,424,724	-		EFB2_03275	0.35	+2.5
3,424,724	-		EFB2_03275	0.35	-0.9
3,424,798	+		EFB2_03275	0.43	-2.9
3,424,805	+		EFB2_03275	0.44	+0.5
3,424,805	+		EFB2_03275	0.44	-1.0
3,424,805	+		EFB2_03275	0.44	+0.0
3,424,805	+		EFB2_03275	0.44	-0.1
3,424,805	+		EFB2_03275	0.44	+1.8
3,424,806	-		EFB2_03275	0.44	+0.6
3,424,833	+		EFB2_03275	0.47	-0.9
3,424,861	+		EFB2_03275	0.50	-0.8
3,424,861	+		EFB2_03275	0.50	+0.6
3,424,861	+		EFB2_03275	0.50	-1.1
3,424,862	-		EFB2_03275	0.50	-0.0
3,424,862	-		EFB2_03275	0.50	-0.9
3,424,870	+		EFB2_03275	0.51	+0.3
3,424,871	-		EFB2_03275	0.51	-0.5
3,424,926	+		EFB2_03275	0.57	-0.1
3,424,926	+		EFB2_03275	0.57	+0.6
3,424,926	+		EFB2_03275	0.57	-0.1
3,424,926	+		EFB2_03275	0.57	+0.9
3,424,926	+		EFB2_03275	0.57	-0.6
3,424,926	+		EFB2_03275	0.57	+0.2
3,424,926	+		EFB2_03275	0.57	+0.3
3,424,927	-		EFB2_03275	0.57	-1.2
3,424,927	-		EFB2_03275	0.57	+1.1
3,424,927	-		EFB2_03275	0.57	-1.7
3,424,927	-		EFB2_03275	0.57	-0.3
3,424,927	-		EFB2_03275	0.57	-1.4
3,424,927	-		EFB2_03275	0.57	+0.9
3,424,950	+		EFB2_03275	0.60	+0.4
3,424,968	+		EFB2_03275	0.61	-0.1
3,424,968	+		EFB2_03275	0.61	+2.2
3,424,983	+		EFB2_03275	0.63	-1.5
3,424,990	+		EFB2_03275	0.64	-2.2
3,424,990	+		EFB2_03275	0.64	+0.4
3,424,990	+		EFB2_03275	0.64	-1.6
3,424,990	+		EFB2_03275	0.64	+0.9
3,424,990	+		EFB2_03275	0.64	+0.1
3,424,991	-		EFB2_03275	0.64	-0.8
3,424,991	-		EFB2_03275	0.64	-0.1
3,424,991	-		EFB2_03275	0.64	+0.5
3,424,991	-		EFB2_03275	0.64	+0.3
3,424,991	-		EFB2_03275	0.64	-0.9
3,425,007	+		EFB2_03275	0.66	-0.9
3,425,007	+		EFB2_03275	0.66	-1.7
3,425,015	-		EFB2_03275	0.67	+1.3
3,425,037	+		EFB2_03275	0.69	+1.9
3,425,038	-		EFB2_03275	0.69	-0.0
3,425,038	-		EFB2_03275	0.69	-0.6
3,425,118	+		EFB2_03275	0.78	-0.5
3,425,118	+		EFB2_03275	0.78	+0.8
3,425,118	+		EFB2_03275	0.78	-0.3
3,425,118	+		EFB2_03275	0.78	+0.4
3,425,118	+		EFB2_03275	0.78	+0.1
3,425,118	+		EFB2_03275	0.78	-3.9
3,425,118	+		EFB2_03275	0.78	-0.1
3,425,118	+		EFB2_03275	0.78	-0.4
3,425,119	-		EFB2_03275	0.78	+1.5
3,425,119	-		EFB2_03275	0.78	-0.2
3,425,119	-		EFB2_03275	0.78	-0.6
3,425,119	-		EFB2_03275	0.78	-1.3
3,425,119	-		EFB2_03275	0.78	+1.6
3,425,119	-		EFB2_03275	0.78	-0.4
3,425,119	-		EFB2_03275	0.78	-1.9
3,425,119	-		EFB2_03275	0.78	-1.5
3,425,119	-		EFB2_03275	0.78	+0.7
3,425,119	-		EFB2_03275	0.78	-1.6
3,425,119	-		EFB2_03275	0.78	-0.3
3,425,120	+		EFB2_03275	0.78	+1.2
3,425,120	+		EFB2_03275	0.78	-1.4
3,425,120	+		EFB2_03275	0.78	-0.3
3,425,120	+		EFB2_03275	0.78	+0.4
3,425,120	+		EFB2_03275	0.78	-1.4
3,425,120	+		EFB2_03275	0.78	+0.1
3,425,120	+		EFB2_03275	0.78	-0.3
3,425,120	+		EFB2_03275	0.78	+0.3
3,425,120	+		EFB2_03275	0.78	+1.6
3,425,121	-		EFB2_03275	0.78	-1.4
3,425,121	-		EFB2_03275	0.78	+0.1
3,425,121	-		EFB2_03275	0.78	+0.6
3,425,121	-		EFB2_03275	0.78	+0.7
3,425,121	-		EFB2_03275	0.78	+2.4
3,425,121	-		EFB2_03275	0.78	+0.6
3,425,138	+		EFB2_03275	0.80	+0.2
3,425,138	+		EFB2_03275	0.80	+0.1
3,425,138	+		EFB2_03275	0.80	+1.4
3,425,138	+		EFB2_03275	0.80	-0.6
3,425,138	+		EFB2_03275	0.80	-0.4
3,425,138	+		EFB2_03275	0.80	-1.5
3,425,138	+		EFB2_03275	0.80	-1.9
3,425,138	+		EFB2_03275	0.80	-0.8
3,425,138	+		EFB2_03275	0.80	-0.7
3,425,139	-		EFB2_03275	0.80	-0.5
3,425,139	-		EFB2_03275	0.80	-0.2
3,425,139	-		EFB2_03275	0.80	-0.3
3,425,139	-		EFB2_03275	0.80	-0.3
3,425,139	-		EFB2_03275	0.80	+2.3
3,425,140	+		EFB2_03275	0.80	-0.8
3,425,140	+		EFB2_03275	0.80	+0.4
3,425,140	+		EFB2_03275	0.80	+0.3
3,425,140	+		EFB2_03275	0.80	-0.7
3,425,140	+		EFB2_03275	0.80	+1.0
3,425,141	-		EFB2_03275	0.80	-1.3
3,425,141	-		EFB2_03275	0.80	-1.3
3,425,141	-		EFB2_03275	0.80	-0.3
3,425,141	-		EFB2_03275	0.80	-3.3
3,425,141	-		EFB2_03275	0.80	-0.3
3,425,141	-		EFB2_03275	0.80	-2.8
3,425,141	-		EFB2_03275	0.80	-2.9
3,425,141	-		EFB2_03275	0.80	+1.5
3,425,179	+		EFB2_03275	0.84	+1.7
3,425,179	+		EFB2_03275	0.84	+0.1
3,425,179	+		EFB2_03275	0.84	-0.5
3,425,180	-		EFB2_03275	0.84	-1.3
3,425,180	-		EFB2_03275	0.84	+1.3
3,425,180	-		EFB2_03275	0.84	-0.1
3,425,180	-		EFB2_03275	0.84	+0.6
3,425,180	-		EFB2_03275	0.84	+0.6
3,425,180	-		EFB2_03275	0.84	-0.6
3,425,180	-		EFB2_03275	0.84	+0.2
3,425,180	-		EFB2_03275	0.84	+1.0
3,425,180	-		EFB2_03275	0.84	+1.6
3,425,180	-		EFB2_03275	0.84	-2.6
3,425,180	-		EFB2_03275	0.84	+0.1
3,425,182	-		EFB2_03275	0.85	-1.0
3,425,182	-		EFB2_03275	0.85	-0.1
3,425,212	+		EFB2_03275	0.88	-1.7
3,425,248	+				-0.0
3,425,248	+				+0.3
3,425,248	+				-1.5
3,425,249	-				-0.7
3,425,272	-				+1.1
3,425,296	+				+0.0
3,425,297	-				-2.8
3,425,312	+				+0.0
3,425,312	+				-1.8
3,425,312	+				-0.5
3,425,312	+				+0.3
3,425,312	+				-2.5
3,425,312	+				+1.1
3,425,312	+				-1.2
3,425,312	+				-0.6
3,425,312	+				-1.9
3,425,312	+				-0.8
3,425,313	-				-0.3
3,425,313	-				+1.1
3,425,313	-				-0.6
3,425,313	-				+1.2
3,425,313	-				+1.0
3,425,313	-				-0.2
3,425,313	-				-0.1
3,425,313	-				+0.7
3,425,313	-				-2.7
3,425,313	-				+0.6
3,425,316	+				-0.7
3,425,316	+				-0.6
3,425,316	+				+0.6
3,425,317	-				-1.2
3,425,317	-				+2.2
3,425,317	-				+0.2
3,425,317	-				-3.0
3,425,317	-				-2.0
3,425,317	-				-2.7
3,425,317	-				+0.2
3,425,317	-				-1.6
3,425,317	-				-0.4
3,425,317	-				+0.1
3,425,317	-				+1.0
3,425,317	-				+0.9
3,425,317	-				+1.2
3,425,317	-				-0.1
3,425,341	+				+1.0
3,425,341	+				-0.6
3,425,342	-				-0.4
3,425,342	-				-0.3
3,425,342	-				+0.3
3,425,408	+				+1.4
3,425,409	-				-1.4
3,425,486	+				+0.6
3,425,487	-				-0.3
3,425,488	+				-0.5
3,425,488	+				-1.2
3,425,488	+				+1.1
3,425,488	+				-1.6
3,425,488	+				+0.0
3,425,488	+				+0.2
3,425,488	+				-0.8
3,425,488	+				-0.8
3,425,488	+				+2.4
3,425,488	+				+0.4
3,425,489	-				+0.9
3,425,489	-				+0.9
3,425,489	-				+0.4
3,425,489	-				+0.7
3,425,489	-				-0.6
3,425,489	-				-0.4
3,425,489	-				+0.3
3,425,489	-				-0.8
3,425,489	-				+0.1
3,425,489	-				+0.2
3,425,489	-				+0.5
3,425,489	-				-0.4
3,425,489	-				-0.0
3,425,489	-				-2.5
3,425,489	-				-0.9
3,425,489	-				-2.6
3,425,489	-				+1.1
3,425,489	-				-0.3
3,425,489	-				-1.1
3,425,489	-				+1.3
3,425,489	-				-0.1
3,425,489	-				-2.3
3,425,489	-				-0.2
3,425,516	+		EFB2_03276	0.11	+0.2
3,425,516	+		EFB2_03276	0.11	+1.2
3,425,517	-		EFB2_03276	0.12	-0.8
3,425,522	+		EFB2_03276	0.12	+1.1
3,425,555	+		EFB2_03276	0.14	+0.3
3,425,555	+		EFB2_03276	0.14	-1.1
3,425,555	+		EFB2_03276	0.14	-1.9
3,425,555	+		EFB2_03276	0.14	+1.0
3,425,555	+		EFB2_03276	0.14	+0.3
3,425,556	-		EFB2_03276	0.14	-0.0
3,425,556	-		EFB2_03276	0.14	-0.6
3,425,556	-		EFB2_03276	0.14	+0.1
3,425,556	-		EFB2_03276	0.14	-1.0
3,425,556	-		EFB2_03276	0.14	+0.7
3,425,556	-		EFB2_03276	0.14	+0.7
3,425,563	+		EFB2_03276	0.14	-2.6
3,425,564	-		EFB2_03276	0.15	+1.4
3,425,576	+		EFB2_03276	0.15	+0.6
3,425,576	+		EFB2_03276	0.15	+0.8
3,425,576	+		EFB2_03276	0.15	-0.0
3,425,577	-		EFB2_03276	0.15	-1.6
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