Strain Fitness in Escherichia fergusonii Becca around EFB2_03142

Experiment: BHIS no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control
3,290,584	-				+0.6
3,290,584	-				-1.5
3,290,584	-				+0.4
3,290,584	-				-1.5
3,290,584	-				+1.1
3,290,584	-				+0.2
3,290,584	-				+0.5
3,290,584	-				-1.7
3,290,584	-				+1.2
3,290,584	-				+0.1
3,290,584	-				-1.0
3,290,584	-				+1.4
3,290,584	-				+0.0
3,290,584	-				+0.0
3,290,584	-				+1.4
3,290,584	-				+0.3
3,290,584	-				-1.8
3,290,584	-				-0.2
3,290,584	-				+1.8
3,290,586	-				-0.3
3,290,586	-				+0.8
3,290,586	-				+1.2
3,290,586	-				+0.1
3,290,586	-				-0.0
3,290,599	-				-1.5
3,290,599	-				-1.1
3,290,602	-				-0.7
3,290,602	-				+0.8
3,290,602	-				+0.2
3,290,602	-				-0.6
3,290,602	-				+0.4
3,290,602	-				+2.9
3,290,602	-				-1.5
3,290,602	-				-1.0
3,290,602	-				-0.2
3,290,602	-				-0.4
3,290,602	-				+2.2
3,290,602	-				-1.1
3,290,602	-				-0.2
3,290,604	-				-0.8
3,290,604	-				+1.7
3,290,604	-				-1.0
3,290,604	-				+0.9
3,290,604	-				+0.3
3,290,604	-				-0.1
3,290,604	-				+1.4
3,290,604	-				+0.7
3,290,604	-				-1.6
3,290,604	-				+1.2
3,290,604	-				-2.6
3,290,604	-				-0.3
3,290,604	-				+1.1
3,290,604	-				-0.5
3,290,604	-				+0.9
3,290,604	-				+1.3
3,290,604	-				-2.8
3,290,604	-				+0.2
3,290,642	-		EFB2_03143	0.13	-0.3
3,290,642	-		EFB2_03143	0.13	+0.9
3,290,642	-		EFB2_03143	0.13	-0.5
3,290,642	-		EFB2_03143	0.13	+0.0
3,290,642	-		EFB2_03143	0.13	+2.8
3,290,642	-		EFB2_03143	0.13	+0.3
3,290,642	-		EFB2_03143	0.13	+0.0
3,290,642	-		EFB2_03143	0.13	-0.3
3,290,642	-		EFB2_03143	0.13	-3.1
3,290,642	-		EFB2_03143	0.13	+0.1
3,290,642	-		EFB2_03143	0.13	+0.0
3,290,642	-		EFB2_03143	0.13	-1.0
3,290,642	-		EFB2_03143	0.13	-1.5
3,290,652	-		EFB2_03143	0.14	+1.0
3,290,652	-		EFB2_03143	0.14	+2.4
3,290,652	-		EFB2_03143	0.14	-0.9
3,290,652	-		EFB2_03143	0.14	-0.4
3,290,652	-		EFB2_03143	0.14	-0.3
3,290,685	-		EFB2_03143	0.19	-1.2
3,290,685	-		EFB2_03143	0.19	+0.7
3,290,685	-		EFB2_03143	0.19	+0.0
3,290,719	-		EFB2_03143	0.23	-2.6
3,290,751	-		EFB2_03143	0.27	-1.8
3,290,751	-		EFB2_03143	0.27	-0.8
3,290,751	-		EFB2_03143	0.27	+0.2
3,290,751	-		EFB2_03143	0.27	-0.1
3,290,751	-		EFB2_03143	0.27	-0.1
3,290,751	-		EFB2_03143	0.27	-0.3
3,290,751	-		EFB2_03143	0.27	-0.8
3,290,775	-		EFB2_03143	0.30	-1.2
3,290,775	-		EFB2_03143	0.30	-1.1
3,290,826	-		EFB2_03143	0.37	+1.4
3,290,826	-		EFB2_03143	0.37	+1.5
3,290,826	-		EFB2_03143	0.37	-0.1
3,290,826	-		EFB2_03143	0.37	+2.3
3,290,826	-		EFB2_03143	0.37	-0.1
3,290,851	-		EFB2_03143	0.40	+0.8
3,290,851	-		EFB2_03143	0.40	-0.5
3,290,851	-		EFB2_03143	0.40	+0.4
3,290,851	-		EFB2_03143	0.40	+1.2
3,290,851	-		EFB2_03143	0.40	-0.3
3,290,851	-		EFB2_03143	0.40	-1.0
3,290,851	-		EFB2_03143	0.40	-0.1
3,290,851	-		EFB2_03143	0.40	-0.4
3,290,851	-		EFB2_03143	0.40	-2.2
3,290,851	-		EFB2_03143	0.40	-0.4
3,290,851	-		EFB2_03143	0.40	+0.9
3,290,851	-		EFB2_03143	0.40	-0.2
3,290,851	-		EFB2_03143	0.40	-1.7
3,290,851	-		EFB2_03143	0.40	-0.6
3,290,851	-		EFB2_03143	0.40	-0.8
3,290,851	-		EFB2_03143	0.40	-0.6
3,290,851	-		EFB2_03143	0.40	+0.0
3,290,851	-		EFB2_03143	0.40	-0.6
3,290,851	-		EFB2_03143	0.40	-1.8
3,290,877	-		EFB2_03143	0.43	-2.1
3,290,877	-		EFB2_03143	0.43	-0.1
3,290,877	-		EFB2_03143	0.43	+1.4
3,290,877	-		EFB2_03143	0.43	+0.4
3,290,877	-		EFB2_03143	0.43	+0.5
3,290,877	-		EFB2_03143	0.43	-0.4
3,290,877	-		EFB2_03143	0.43	-0.1
3,290,877	-		EFB2_03143	0.43	-0.4
3,290,877	-		EFB2_03143	0.43	+0.5
3,290,877	-		EFB2_03143	0.43	-0.4
3,290,877	-		EFB2_03143	0.43	-0.3
3,290,885	-		EFB2_03143	0.44	-0.8
3,290,930	-		EFB2_03143	0.50	-0.9
3,290,930	-		EFB2_03143	0.50	+0.5
3,290,933	-		EFB2_03143	0.50	-0.1
3,290,933	-		EFB2_03143	0.50	-1.0
3,290,933	-		EFB2_03143	0.50	-2.7
3,290,933	-		EFB2_03143	0.50	-1.3
3,290,933	-		EFB2_03143	0.50	+0.5
3,290,933	-		EFB2_03143	0.50	-0.9
3,290,933	-		EFB2_03143	0.50	-0.5
3,290,933	-		EFB2_03143	0.50	-0.9
3,290,933	-		EFB2_03143	0.50	-0.5
3,290,933	-		EFB2_03143	0.50	-0.5
3,290,978	-		EFB2_03143	0.56	-0.4
3,291,032	-		EFB2_03143	0.63	-0.0
3,291,032	-		EFB2_03143	0.63	+0.7
3,291,032	-		EFB2_03143	0.63	-1.7
3,291,032	-		EFB2_03143	0.63	-0.9
3,291,032	-		EFB2_03143	0.63	+0.0
3,291,032	-		EFB2_03143	0.63	-0.3
3,291,034	-		EFB2_03143	0.63	+1.5
3,291,034	-		EFB2_03143	0.63	+1.2
3,291,034	-		EFB2_03143	0.63	-1.1
3,291,113	-		EFB2_03143	0.73	-0.1
3,291,113	-		EFB2_03143	0.73	-1.0
3,291,113	-		EFB2_03143	0.73	+0.5
3,291,241	-		EFB2_03143	0.89	+0.1
3,291,241	-		EFB2_03143	0.89	-0.0
3,291,241	-		EFB2_03143	0.89	+1.2
3,291,241	-		EFB2_03143	0.89	+0.6
3,291,241	-		EFB2_03143	0.89	+0.5
3,291,301	-				-0.2
3,291,301	-				-0.3
3,291,370	-				-0.6
3,291,370	-				+0.4
3,291,370	-				+1.5
3,291,409	+				+1.2
3,291,409	+				+0.9
3,291,409	+				-0.3
3,291,410	-				+0.4
3,291,410	-				+0.6
3,291,410	-				-0.1
3,291,410	-				+0.1
3,291,410	-				-0.4
3,291,410	-				-0.8
3,291,410	-				+0.1
3,291,410	-				-2.3
3,291,413	-				-0.0
3,291,413	-				-0.6
3,291,413	-				-2.4
3,291,432	+				-0.0
3,291,432	+				+1.1
3,291,432	+				+1.2
3,291,432	+				-0.3
3,291,432	+				-1.3
3,291,432	+				+0.1
3,291,432	+				-0.6
3,291,432	+				-1.4
3,291,432	+				+0.5
3,291,432	+				-0.7
3,291,432	+				-0.2
3,291,432	+				-1.5
3,291,432	+				-1.0
3,291,432	+				+1.0
3,291,432	+				-1.7
3,291,432	+				+1.2
3,291,432	+				+1.1
3,291,432	+				+0.4
3,291,432	+				-0.5
3,291,432	+				+0.8
3,291,432	+				+0.3
3,291,432	+				-0.0
3,291,432	+				+0.3
3,291,432	+				+0.9
3,291,432	+				+0.6
3,291,432	+				-1.1
3,291,432	+				-0.1
3,291,432	+				+1.0
3,291,432	+				+1.3
3,291,432	+				+0.3
3,291,432	+				+1.4
3,291,432	+				+0.1
3,291,432	+				-1.8
3,291,432	+				-1.0
3,291,432	+				-0.7
3,291,432	+				+0.1
3,291,432	+				-0.2
3,291,432	+				+1.2
3,291,432	+				+0.5
3,291,432	+				+0.2
3,291,432	+				-1.4
3,291,432	+				+1.0
3,291,432	+				-1.7
3,291,432	+				+0.8
3,291,433	-				-1.3
3,291,433	-				+0.4
3,291,433	-				+0.7
3,291,433	-				+0.1
3,291,433	-				+0.6
3,291,433	-				+1.2
3,291,433	-				+0.8
3,291,433	-				-2.9
3,291,433	-				+0.6
3,291,433	-				-2.5
3,291,433	-				-0.7
3,291,433	-				-0.4
3,291,433	-				-0.4
3,291,433	-				-0.6
3,291,433	-				-0.3
3,291,433	-				+1.0
3,291,433	-				-0.0
3,291,433	-				-0.1
3,291,433	-				+0.2
3,291,433	-				-0.9
3,291,433	-				-1.8
3,291,433	-				+1.1
3,291,433	-				-0.5
3,291,433	-				+2.2
3,291,433	-				-0.4
3,291,433	-				-0.2
3,291,433	-				+0.3
3,291,433	-				+0.4
3,291,433	-				-0.5
3,291,433	-				+0.9
3,291,433	-				+0.5
3,291,433	-				+0.7
3,291,433	-				+0.5
3,291,433	-				+0.3
3,291,433	-				-0.4
3,291,433	-				+0.5
3,291,433	-				+1.2
3,291,433	-				+0.9
3,291,433	-				+1.0
3,291,433	-				+0.0
3,291,433	-				-0.4
3,291,433	-				+1.4
3,291,433	-				+0.9
3,291,433	-				-1.0
3,291,433	-				+2.3
3,291,433	-				+0.4
3,291,433	-				-1.7
3,291,433	-				-0.2
3,291,433	-				-2.2
3,291,434	+				-0.6
3,291,434	+				+0.3
3,291,434	+				+1.6
3,291,434	+				-1.0
3,291,434	+				-2.5
3,291,434	+				+0.2
3,291,434	+				+0.4
3,291,434	+				+2.2
3,291,434	+				-1.5
3,291,434	+				+0.6
3,291,435	-				-0.1
3,291,435	-				+1.2
3,291,435	-				-0.1
3,291,435	-				+0.4
3,291,435	-				-0.4
3,291,435	-				-1.9
3,291,435	-				+0.4
3,291,435	-				+1.2
3,291,435	-				+0.8
3,291,435	-				+1.9
3,291,435	-				-0.1
3,291,435	-				-1.7
3,291,435	-				-0.9
3,291,468	+				+0.2
3,291,492	+				+1.2
3,291,492	+				+0.7
3,291,492	+				+0.6
3,291,492	+				+1.5
3,291,493	-				+0.6
3,291,493	-				-2.7
3,291,493	-				-0.3
3,291,525	+				-0.4