Strain Fitness in Escherichia fergusonii Becca around EFB2_01564

Experiment: BHIS no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control
1,635,954	+				-0.1
1,635,958	+				-0.6
1,635,959	-				-1.0
1,635,959	-				-0.1
1,635,959	-				-1.4
1,635,959	-				+0.2
1,635,959	-				-0.7
1,635,959	-				-2.5
1,635,961	-				-2.3
1,635,961	-				-1.0
1,635,961	-				+0.6
1,635,961	-				-1.0
1,635,961	-				-1.5
1,635,961	-				-0.6
1,635,961	-				+1.2
1,635,961	-				-1.3
1,635,961	-				-2.8
1,635,961	-				+1.0
1,635,968	-				-0.6
1,635,968	-				-2.3
1,635,968	-				-0.1
1,635,968	-				-0.1
1,635,997	-				-1.8
1,636,026	+				-1.0
1,636,027	-				+0.8
1,636,027	-				-0.4
1,636,032	+				-1.7
1,636,032	+				-0.8
1,636,033	-				-1.0
1,636,033	-				-0.1
1,636,033	-				-0.5
1,636,033	-				-0.6
1,636,033	-				-1.8
1,636,033	-				+0.0
1,636,074	+				-1.4
1,636,074	+				-1.8
1,636,074	+				-1.1
1,636,074	+				-0.3
1,636,085	+				-0.3
1,636,085	+				+1.3
1,636,085	+				-2.8
1,636,086	-				+1.7
1,636,086	-				-0.7
1,636,086	-				-1.4
1,636,118	+				-0.4
1,636,118	+				-2.3
1,636,119	-				-0.4
1,636,119	-				-3.0
1,636,123	+				-1.3
1,636,123	+				-2.3
1,636,123	+				-0.8
1,636,123	+				-2.2
1,636,123	+				-1.3
1,636,123	+				+1.9
1,636,123	+				-0.4
1,636,123	+				-1.3
1,636,123	+				+0.5
1,636,123	+				-0.2
1,636,123	+				-0.4
1,636,123	+				+0.2
1,636,123	+				+0.9
1,636,123	+				-0.3
1,636,123	+				-0.6
1,636,123	+				-0.4
1,636,123	+				-1.7
1,636,123	+				+1.6
1,636,123	+				-2.3
1,636,123	+				-0.6
1,636,123	+				-2.4
1,636,123	+				-2.1
1,636,123	+				-0.8
1,636,123	+				-0.8
1,636,123	+				+1.5
1,636,123	+				-2.5
1,636,123	+				-1.3
1,636,123	+				-0.4
1,636,123	+				-1.4
1,636,124	-				-0.6
1,636,124	-				+0.6
1,636,124	-				-0.6
1,636,124	-				+0.1
1,636,124	-				+0.2
1,636,124	-				-1.5
1,636,124	-				-1.1
1,636,124	-				-0.5
1,636,124	-				+0.6
1,636,124	-				+1.1
1,636,124	-				+2.1
1,636,124	-				-0.6
1,636,124	-				-0.2
1,636,124	-				-0.2
1,636,124	-				-0.3
1,636,124	-				-0.2
1,636,124	-				+1.2
1,636,124	-				-0.3
1,636,124	-				+0.2
1,636,124	-				+0.1
1,636,124	-				+1.4
1,636,124	-				-0.3
1,636,124	-				-0.6
1,636,124	-				-2.2
1,636,124	-				+0.2
1,636,124	-				+0.1
1,636,124	-				+0.7
1,636,124	-				+0.7
1,636,124	-				-0.3
1,636,124	-				-0.0
1,636,124	-				-0.4
1,636,124	-				-0.7
1,636,124	-				+0.3
1,636,124	-				-0.1
1,636,124	-				+1.0
1,636,124	-				+2.3
1,636,124	-				-0.1
1,636,124	-				+1.9
1,636,124	-				-2.3
1,636,124	-				+1.6
1,636,124	-				+1.8
1,636,124	-				+0.5
1,636,125	+				-1.3
1,636,126	-				+0.8
1,636,126	-				+0.9
1,636,126	-				-0.4
1,636,126	-				-0.1
1,636,148	+				-2.6
1,636,148	+				-2.5
1,636,148	+				-2.5
1,636,148	+				+0.2
1,636,148	+				-0.3
1,636,149	-				-0.4
1,636,149	-				+0.7
1,636,149	-				+0.7
1,636,149	-				-0.5
1,636,149	-				+0.1
1,636,149	-				+0.5
1,636,149	-				-2.2
1,636,149	-				-0.8
1,636,149	-				+0.7
1,636,149	-				+1.1
1,636,149	-				-0.3
1,636,149	-				-0.5
1,636,149	-				+2.0
1,636,149	-				-1.0
1,636,152	+				-1.2
1,636,152	+				-0.1
1,636,152	+				-1.9
1,636,152	+				-1.4
1,636,152	+				+1.7
1,636,152	+				-0.0
1,636,152	+				+0.2
1,636,153	-				-0.1
1,636,153	-				-1.0
1,636,153	-				+0.2
1,636,153	-				-0.2
1,636,153	-				-0.7
1,636,153	-				+0.7
1,636,153	-				-1.0
1,636,153	-				-1.1
1,636,153	-				-0.9
1,636,153	-				-0.1
1,636,153	-				+0.4
1,636,153	-				+0.2
1,636,153	-				-1.3
1,636,153	-				-0.3
1,636,153	-				+0.4
1,636,154	-				-0.3
1,636,155	+				-0.4
1,636,155	+				-0.9
1,636,155	+				-3.0
1,636,155	+				-0.8
1,636,155	+				-1.0
1,636,155	+				-2.3
1,636,156	-				+0.3
1,636,156	-				-1.4
1,636,156	-				+0.6
1,636,156	-				+0.4
1,636,156	-				-0.7
1,636,156	-				+0.3
1,636,156	-				+0.7
1,636,156	-				+1.6
1,636,156	-				-1.1
1,636,156	-				-3.3
1,636,156	-				-0.3
1,636,156	-				-0.6
1,636,156	-				-0.8
1,636,159	+				+0.0
1,636,160	-				+0.5
1,636,160	-				+0.8
1,636,182	+				-0.8
1,636,189	+				-1.1
1,636,189	+				+0.3
1,636,197	-				+0.6
1,636,263	+				-1.0
1,636,263	+				+0.9
1,636,264	-				+2.2
1,636,264	-				+0.8
1,636,264	-				+1.1
1,636,265	+				-0.8
1,636,265	+				+0.4
1,636,265	+				-0.7
1,636,265	+				-1.3
1,636,266	-				-2.0
1,636,266	-				+1.6
1,636,266	-				+0.3
1,636,266	-				+1.9
1,636,346	+		EFB2_01563	0.13	-1.1
1,636,346	+		EFB2_01563	0.13	+1.4
1,636,422	-		EFB2_01563	0.30	-1.3
1,636,435	+		EFB2_01563	0.33	+0.6
1,636,435	+		EFB2_01563	0.33	+0.4
1,636,452	+		EFB2_01563	0.36	+0.2
1,636,452	+		EFB2_01563	0.36	-0.0
1,636,456	+		EFB2_01563	0.37	-0.1
1,636,456	+		EFB2_01563	0.37	-0.5
1,636,456	+		EFB2_01563	0.37	+1.4
1,636,456	+		EFB2_01563	0.37	+1.1
1,636,456	+		EFB2_01563	0.37	+1.2
1,636,457	-		EFB2_01563	0.38	+0.1
1,636,457	-		EFB2_01563	0.38	-0.5
1,636,457	-		EFB2_01563	0.38	-0.5
1,636,457	-		EFB2_01563	0.38	+3.6
1,636,457	-		EFB2_01563	0.38	-0.6
1,636,524	+		EFB2_01563	0.52	-0.1
1,636,524	+		EFB2_01563	0.52	-0.4
1,636,524	+		EFB2_01563	0.52	-0.4
1,636,524	+		EFB2_01563	0.52	-2.8
1,636,525	-		EFB2_01563	0.52	-1.5
1,636,525	-		EFB2_01563	0.52	+2.9
1,636,578	+		EFB2_01563	0.64	-0.6
1,636,578	+		EFB2_01563	0.64	+1.0
1,636,578	+		EFB2_01563	0.64	-0.4
1,636,578	+		EFB2_01563	0.64	-0.9
1,636,579	-		EFB2_01563	0.64	-0.4
1,636,604	+		EFB2_01563	0.70	-2.2
1,636,604	+		EFB2_01563	0.70	-0.9
1,636,605	-		EFB2_01563	0.70	+0.4
1,636,605	-		EFB2_01563	0.70	+1.1
1,636,680	+		EFB2_01563	0.86	-0.3
1,636,680	+		EFB2_01563	0.86	-1.5
1,636,680	+		EFB2_01563	0.86	-0.3
1,636,680	+		EFB2_01563	0.86	+1.4
1,636,694	-		EFB2_01563	0.89	-1.0
1,636,718	-				-0.1
1,636,739	+				-0.9
1,636,739	+				+0.5
1,636,739	+				+0.8
1,636,739	+				-0.5
1,636,740	-				-0.6
1,636,740	-				+0.2
1,636,740	-				+1.3
1,636,740	-				+4.8
1,636,740	-				+1.2
1,636,740	-				+1.5
1,636,740	-				-0.6
1,636,754	+				-0.7
1,636,754	+				-2.7
1,636,754	+				+1.0
1,636,754	+				-1.2
1,636,754	+				+0.1
1,636,754	+				-0.3
1,636,754	+				+0.7
1,636,754	+				-1.3
1,636,754	+				+1.1
1,636,755	-				-2.0
1,636,755	-				+0.1
1,636,760	+				-2.7
1,636,760	+				+1.2
1,636,760	+				+0.6
1,636,760	+				+0.5
1,636,761	-				+0.7
1,636,761	-				+0.3
1,636,762	+				+0.8
1,636,762	+				+0.3
1,636,762	+				+0.4
1,636,762	+				-0.4
1,636,762	+				-0.7
1,636,762	+				+0.7
1,636,762	+				+1.8
1,636,762	+				+1.0
1,636,762	+				+0.2
1,636,762	+				-0.5
1,636,762	+				+1.1
1,636,762	+				+0.2
1,636,763	-				+0.3
1,636,763	-				+0.7
1,636,763	-				-1.1
1,636,763	-				-0.2
1,636,763	-				-0.2
1,636,763	-				-1.4
1,636,763	-				+0.5
1,636,763	-				-0.8
1,636,763	-				-0.1
1,636,763	-				+0.2
1,636,763	-				-1.6
1,636,763	-				+0.4
1,636,774	+				+1.7
1,636,774	+				-0.6
1,636,774	+				+0.8
1,636,774	+				-0.6
1,636,774	+				+0.1
1,636,774	+				+0.1
1,636,775	-				-0.4
1,636,775	-				+0.6
1,636,775	-				-0.3
1,636,775	-				+1.1
1,636,775	-				-1.4
1,636,775	-				-0.7
1,636,775	-				+1.3
1,636,775	-				+0.2
1,636,799	+				+0.6
1,636,799	+				+0.3
1,636,799	+				-1.5
1,636,799	+				+1.8
1,636,799	+				-0.8
1,636,799	+				-0.6
1,636,799	+				-0.5
1,636,800	-				+2.2
1,636,800	-				+0.3
1,636,800	-				-1.5
1,636,800	-				+0.0
1,636,800	-				+0.2
1,636,800	-				-0.7
1,636,800	-				+0.5
1,636,802	+				+0.8
1,636,802	+				-0.4
1,636,802	+				+0.8
1,636,803	-				+2.0
1,636,803	-				+0.0
1,636,803	-				+1.9
1,636,803	-				-0.1
1,636,803	-				-0.4
1,636,810	+				-0.5
1,636,810	+				-0.3
1,636,811	-				+0.4
1,636,811	-				-2.3
1,636,811	-				+1.0
1,636,811	-				-0.4
1,636,811	-				-1.7
1,636,822	+				-1.1
1,636,822	+				-0.1
1,636,850	+				-0.5
1,636,850	+				-0.8
1,636,850	+				-0.4
1,636,851	-				+0.3
1,636,851	-				+0.9
1,636,859	+				+2.2
1,636,866	+				+1.3
1,636,866	+				+1.1
1,636,866	+				+0.8
1,636,867	-				-1.7
1,636,880	+		EFB2_01564	0.11	+0.0
1,636,880	+		EFB2_01564	0.11	-1.6
1,636,880	+		EFB2_01564	0.11	-1.0
1,636,881	-		EFB2_01564	0.12	+0.8
1,636,881	-		EFB2_01564	0.12	+1.2
1,636,881	-		EFB2_01564	0.12	+1.2
1,636,881	-		EFB2_01564	0.12	-0.1
1,636,881	-		EFB2_01564	0.12	-0.8
1,636,881	-		EFB2_01564	0.12	-2.1
1,636,948	+		EFB2_01564	0.25	+0.7
1,636,948	+		EFB2_01564	0.25	+0.0
1,636,948	+		EFB2_01564	0.25	+0.1
1,636,949	-		EFB2_01564	0.25	+0.1
1,637,006	+		EFB2_01564	0.37	+1.1
1,637,006	+		EFB2_01564	0.37	-0.2
1,637,006	+		EFB2_01564	0.37	-1.5
1,637,006	+		EFB2_01564	0.37	-0.6
1,637,006	+		EFB2_01564	0.37	-0.6
1,637,007	-		EFB2_01564	0.37	-0.4
1,637,007	-		EFB2_01564	0.37	+0.2
1,637,007	-		EFB2_01564	0.37	+0.2
1,637,018	+		EFB2_01564	0.39	+1.5
1,637,019	-		EFB2_01564	0.39	+2.0
1,637,028	+		EFB2_01564	0.41	-0.3
1,637,028	+		EFB2_01564	0.41	+0.7
1,637,028	+		EFB2_01564	0.41	-0.3
1,637,028	+		EFB2_01564	0.41	-0.3
1,637,028	+		EFB2_01564	0.41	+0.6
1,637,028	+		EFB2_01564	0.41	-0.1
1,637,028	+		EFB2_01564	0.41	+0.1
1,637,028	+		EFB2_01564	0.41	-1.1
1,637,028	+		EFB2_01564	0.41	+0.2
1,637,028	+		EFB2_01564	0.41	-1.2
1,637,028	+		EFB2_01564	0.41	+1.8
1,637,028	+		EFB2_01564	0.41	+0.4
1,637,028	+		EFB2_01564	0.41	-0.2
1,637,028	+		EFB2_01564	0.41	-3.1
1,637,028	+		EFB2_01564	0.41	-0.4
1,637,028	+		EFB2_01564	0.41	-1.6
1,637,028	+		EFB2_01564	0.41	+0.6
1,637,028	+		EFB2_01564	0.41	-1.7
1,637,028	+		EFB2_01564	0.41	+2.2
1,637,028	+		EFB2_01564	0.41	-0.6
1,637,028	+		EFB2_01564	0.41	+0.4
1,637,028	+		EFB2_01564	0.41	-0.6
1,637,028	+		EFB2_01564	0.41	+1.1
1,637,028	+		EFB2_01564	0.41	+0.1
1,637,028	+		EFB2_01564	0.41	-0.4
1,637,028	+		EFB2_01564	0.41	-0.8
1,637,028	+		EFB2_01564	0.41	-0.4
1,637,028	+		EFB2_01564	0.41	-0.1
1,637,028	+		EFB2_01564	0.41	-0.8
1,637,028	+		EFB2_01564	0.41	+0.8
1,637,028	+		EFB2_01564	0.41	-0.7
1,637,028	+		EFB2_01564	0.41	+0.6
1,637,028	+		EFB2_01564	0.41	+0.8
1,637,028	+		EFB2_01564	0.41	+0.5
1,637,028	+		EFB2_01564	0.41	+1.0
1,637,028	+		EFB2_01564	0.41	-1.8
1,637,029	-		EFB2_01564	0.41	+0.9
1,637,029	-		EFB2_01564	0.41	-2.0
1,637,029	-		EFB2_01564	0.41	-1.5
1,637,029	-		EFB2_01564	0.41	-1.8
1,637,029	-		EFB2_01564	0.41	-1.5
1,637,029	-		EFB2_01564	0.41	+1.1
1,637,029	-		EFB2_01564	0.41	-0.8
1,637,029	-		EFB2_01564	0.41	+1.9
1,637,029	-		EFB2_01564	0.41	-2.2
1,637,029	-		EFB2_01564	0.41	-0.2
1,637,029	-		EFB2_01564	0.41	+0.6
1,637,029	-		EFB2_01564	0.41	-0.6
1,637,029	-		EFB2_01564	0.41	+0.0
1,637,029	-		EFB2_01564	0.41	+0.3
1,637,029	-		EFB2_01564	0.41	+0.2
1,637,029	-		EFB2_01564	0.41	+2.9
1,637,029	-		EFB2_01564	0.41	+2.8
1,637,029	-		EFB2_01564	0.41	-1.6
1,637,029	-		EFB2_01564	0.41	+0.0
1,637,029	-		EFB2_01564	0.41	-1.0
1,637,029	-		EFB2_01564	0.41	+0.3
1,637,029	-		EFB2_01564	0.41	-0.8
1,637,029	-		EFB2_01564	0.41	-2.5
1,637,054	+		EFB2_01564	0.46	+0.1
1,637,054	+		EFB2_01564	0.46	-0.6
1,637,055	-		EFB2_01564	0.47	-0.5
1,637,055	-		EFB2_01564	0.47	+0.5
1,637,130	+		EFB2_01564	0.62	-2.2
1,637,131	-		EFB2_01564	0.62	+0.6
1,637,139	+		EFB2_01564	0.64	+0.6
1,637,139	+		EFB2_01564	0.64	+1.0
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