Strain Fitness in Escherichia fergusonii Becca around EFB2_01370

Experiment: BHIS no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control
1,418,197	+				-1.0
1,418,197	+				-1.1
1,418,198	-				-1.5
1,418,256	+		EFB2_01369	0.14	+2.6
1,418,256	+		EFB2_01369	0.14	-0.5
1,418,256	+		EFB2_01369	0.14	+0.6
1,418,256	+		EFB2_01369	0.14	-0.5
1,418,256	+		EFB2_01369	0.14	-1.2
1,418,256	+		EFB2_01369	0.14	-1.4
1,418,257	-		EFB2_01369	0.14	-0.8
1,418,293	+		EFB2_01369	0.19	+0.8
1,418,293	+		EFB2_01369	0.19	+1.2
1,418,293	+		EFB2_01369	0.19	-0.4
1,418,293	+		EFB2_01369	0.19	-0.4
1,418,293	+		EFB2_01369	0.19	-0.9
1,418,293	+		EFB2_01369	0.19	+1.2
1,418,293	+		EFB2_01369	0.19	+1.2
1,418,294	-		EFB2_01369	0.19	+0.6
1,418,294	-		EFB2_01369	0.19	-1.1
1,418,294	-		EFB2_01369	0.19	+0.6
1,418,294	-		EFB2_01369	0.19	-0.5
1,418,294	-		EFB2_01369	0.19	-0.5
1,418,294	-		EFB2_01369	0.19	-0.9
1,418,294	-		EFB2_01369	0.19	+1.0
1,418,294	-		EFB2_01369	0.19	-1.6
1,418,294	-		EFB2_01369	0.19	-0.9
1,418,294	-		EFB2_01369	0.19	-0.1
1,418,294	-		EFB2_01369	0.19	-2.2
1,418,316	+		EFB2_01369	0.21	-0.7
1,418,343	+		EFB2_01369	0.24	-0.2
1,418,344	-		EFB2_01369	0.25	+0.0
1,418,396	+		EFB2_01369	0.31	+0.5
1,418,396	+		EFB2_01369	0.31	+1.3
1,418,396	+		EFB2_01369	0.31	-1.8
1,418,397	-		EFB2_01369	0.31	+2.9
1,418,397	-		EFB2_01369	0.31	+0.1
1,418,397	-		EFB2_01369	0.31	+1.1
1,418,397	-		EFB2_01369	0.31	-0.9
1,418,397	-		EFB2_01369	0.31	-2.2
1,418,397	-		EFB2_01369	0.31	+0.5
1,418,409	+		EFB2_01369	0.32	-1.6
1,418,441	+		EFB2_01369	0.36	+0.7
1,418,441	+		EFB2_01369	0.36	-1.2
1,418,441	+		EFB2_01369	0.36	-2.6
1,418,442	-		EFB2_01369	0.36	-1.9
1,418,468	+		EFB2_01369	0.39	-0.1
1,418,468	+		EFB2_01369	0.39	-2.2
1,418,480	+		EFB2_01369	0.41	+1.0
1,418,480	+		EFB2_01369	0.41	+1.9
1,418,480	+		EFB2_01369	0.41	-0.7
1,418,481	-		EFB2_01369	0.41	+0.6
1,418,481	-		EFB2_01369	0.41	+0.3
1,418,502	+		EFB2_01369	0.43	-0.4
1,418,502	+		EFB2_01369	0.43	-1.1
1,418,502	+		EFB2_01369	0.43	+0.2
1,418,502	+		EFB2_01369	0.43	-0.8
1,418,502	+		EFB2_01369	0.43	+1.4
1,418,502	+		EFB2_01369	0.43	+0.4
1,418,502	+		EFB2_01369	0.43	+0.8
1,418,502	+		EFB2_01369	0.43	+0.7
1,418,502	+		EFB2_01369	0.43	+0.1
1,418,503	-		EFB2_01369	0.43	-1.4
1,418,503	-		EFB2_01369	0.43	-1.1
1,418,503	-		EFB2_01369	0.43	-0.2
1,418,503	-		EFB2_01369	0.43	-0.1
1,418,503	-		EFB2_01369	0.43	+0.8
1,418,503	-		EFB2_01369	0.43	-1.9
1,418,503	-		EFB2_01369	0.43	-0.1
1,418,503	-		EFB2_01369	0.43	+0.6
1,418,503	-		EFB2_01369	0.43	+0.2
1,418,503	-		EFB2_01369	0.43	-0.8
1,418,503	-		EFB2_01369	0.43	+0.3
1,418,503	-		EFB2_01369	0.43	+0.8
1,418,503	-		EFB2_01369	0.43	+0.8
1,418,503	-		EFB2_01369	0.43	-1.7
1,418,503	-		EFB2_01369	0.43	+0.7
1,418,503	-		EFB2_01369	0.43	-0.8
1,418,503	-		EFB2_01369	0.43	+0.5
1,418,503	-		EFB2_01369	0.43	-1.4
1,418,511	+		EFB2_01369	0.44	+1.7
1,418,512	-		EFB2_01369	0.44	+0.1
1,418,512	-		EFB2_01369	0.44	+0.3
1,418,568	+		EFB2_01369	0.51	+0.5
1,418,568	+		EFB2_01369	0.51	+1.0
1,418,569	-		EFB2_01369	0.51	+1.1
1,418,569	-		EFB2_01369	0.51	-0.0
1,418,583	+		EFB2_01369	0.53	+0.0
1,418,583	+		EFB2_01369	0.53	+2.0
1,418,583	+		EFB2_01369	0.53	-0.0
1,418,583	+		EFB2_01369	0.53	-1.4
1,418,583	+		EFB2_01369	0.53	+0.3
1,418,583	+		EFB2_01369	0.53	-0.9
1,418,584	-		EFB2_01369	0.53	-0.6
1,418,584	-		EFB2_01369	0.53	-0.2
1,418,584	-		EFB2_01369	0.53	-2.1
1,418,584	-		EFB2_01369	0.53	+0.1
1,418,584	-		EFB2_01369	0.53	+1.3
1,418,584	-		EFB2_01369	0.53	+1.6
1,418,586	+		EFB2_01369	0.53	+1.8
1,418,586	+		EFB2_01369	0.53	-0.4
1,418,587	-		EFB2_01369	0.53	-0.5
1,418,587	-		EFB2_01369	0.53	+0.3
1,418,643	+		EFB2_01369	0.60	+1.8
1,418,643	+		EFB2_01369	0.60	-0.0
1,418,643	+		EFB2_01369	0.60	-1.3
1,418,644	-		EFB2_01369	0.60	-0.4
1,418,693	+		EFB2_01369	0.66	+0.1
1,418,694	-		EFB2_01369	0.66	-0.7
1,418,694	-		EFB2_01369	0.66	-1.9
1,418,694	-		EFB2_01369	0.66	-0.1
1,418,704	+		EFB2_01369	0.67	+0.5
1,418,705	-		EFB2_01369	0.67	-0.3
1,418,721	-		EFB2_01369	0.69	+1.2
1,418,721	-		EFB2_01369	0.69	+0.4
1,418,736	+		EFB2_01369	0.71	-0.9
1,418,843	+		EFB2_01369	0.84	-1.1
1,418,843	+		EFB2_01369	0.84	-2.2
1,418,843	+		EFB2_01369	0.84	-0.3
1,418,843	+		EFB2_01369	0.84	-0.2
1,418,844	-		EFB2_01369	0.84	+0.9
1,418,844	-		EFB2_01369	0.84	+0.4
1,418,844	-		EFB2_01369	0.84	+1.6
1,418,844	-		EFB2_01369	0.84	+1.3
1,418,844	-		EFB2_01369	0.84	-0.6
1,418,844	-		EFB2_01369	0.84	-0.1
1,418,854	+		EFB2_01369	0.85	-0.7
1,418,855	+		EFB2_01369	0.85	-2.6
1,418,855	+		EFB2_01369	0.85	-3.1
1,418,855	+		EFB2_01369	0.85	-0.1
1,418,855	+		EFB2_01369	0.85	-0.3
1,418,855	+		EFB2_01369	0.85	-0.4
1,418,855	+		EFB2_01369	0.85	-0.9
1,418,855	+		EFB2_01369	0.85	+1.1
1,418,855	+		EFB2_01369	0.85	-1.3
1,418,855	+		EFB2_01369	0.85	-0.3
1,418,856	-		EFB2_01369	0.85	+0.1
1,418,856	-		EFB2_01369	0.85	+0.1
1,418,856	-		EFB2_01369	0.85	+1.5
1,418,856	-		EFB2_01369	0.85	+1.2
1,418,856	-		EFB2_01369	0.85	+1.0
1,418,856	-		EFB2_01369	0.85	-0.8
1,418,856	-		EFB2_01369	0.85	+1.7
1,418,856	-		EFB2_01369	0.85	+0.5
1,418,856	-		EFB2_01369	0.85	+1.0
1,418,856	-		EFB2_01369	0.85	-0.9
1,418,856	-		EFB2_01369	0.85	+0.4
1,418,856	-		EFB2_01369	0.85	+0.8
1,418,856	-		EFB2_01369	0.85	-1.3
1,418,856	-		EFB2_01369	0.85	-0.4
1,418,856	-		EFB2_01369	0.85	+0.3
1,418,856	-		EFB2_01369	0.85	+1.0
1,418,856	-		EFB2_01369	0.85	+0.1
1,418,856	-		EFB2_01369	0.85	-0.6
1,418,856	-		EFB2_01369	0.85	-0.2
1,418,856	-		EFB2_01369	0.85	+0.3
1,418,856	-		EFB2_01369	0.85	-0.4
1,418,857	+		EFB2_01369	0.85	-0.1
1,418,857	+		EFB2_01369	0.85	+0.4
1,418,857	+		EFB2_01369	0.85	+0.3
1,418,857	+		EFB2_01369	0.85	-2.4
1,418,857	+		EFB2_01369	0.85	+0.7
1,418,857	+		EFB2_01369	0.85	-0.2
1,418,857	+		EFB2_01369	0.85	-0.7
1,418,857	+		EFB2_01369	0.85	-0.2
1,418,857	+		EFB2_01369	0.85	-0.6
1,418,857	+		EFB2_01369	0.85	+0.3
1,418,857	+		EFB2_01369	0.85	-0.6
1,418,857	+		EFB2_01369	0.85	-0.2
1,418,858	-		EFB2_01369	0.85	+0.5
1,418,858	-		EFB2_01369	0.85	+0.8
1,418,858	-		EFB2_01369	0.85	-0.6
1,418,858	-		EFB2_01369	0.85	-0.6
1,418,858	-		EFB2_01369	0.85	-0.1
1,418,858	-		EFB2_01369	0.85	+0.3
1,418,858	-		EFB2_01369	0.85	-1.0
1,418,858	-		EFB2_01369	0.85	-0.1
1,418,858	-		EFB2_01369	0.85	+0.2
1,418,858	-		EFB2_01369	0.85	-0.2
1,418,858	-		EFB2_01369	0.85	+0.5
1,418,858	-		EFB2_01369	0.85	+0.4
1,418,858	-		EFB2_01369	0.85	+0.3
1,418,858	-		EFB2_01369	0.85	+1.3
1,418,858	-		EFB2_01369	0.85	-0.3
1,418,858	-		EFB2_01369	0.85	+0.5
1,418,858	-		EFB2_01369	0.85	+1.4
1,418,858	-		EFB2_01369	0.85	-0.6
1,418,858	-		EFB2_01369	0.85	+1.4
1,418,858	-		EFB2_01369	0.85	-0.7
1,418,858	-		EFB2_01369	0.85	-0.9
1,418,858	-		EFB2_01369	0.85	-1.1
1,418,858	-		EFB2_01369	0.85	-0.3
1,418,858	-		EFB2_01369	0.85	+0.4
1,418,858	-		EFB2_01369	0.85	-0.8
1,418,874	-		EFB2_01369	0.87	+0.9
1,418,913	-				-1.5
1,418,936	+				+0.8
1,418,936	+				+0.5
1,418,936	+				-0.0
1,418,936	+				-0.4
1,418,936	+				+0.6
1,418,936	+				-1.7
1,418,936	+				-1.0
1,418,936	+				+0.1
1,418,936	+				+0.4
1,418,937	-				-1.0
1,418,937	-				+2.2
1,418,937	-				-0.6
1,418,937	-				+0.0
1,418,937	-				+0.6
1,418,937	-				-0.6
1,418,937	-				+0.3
1,418,937	-				+0.0
1,418,937	-				-0.9
1,418,937	-				+0.2
1,418,937	-				+0.5
1,418,937	-				-0.5
1,418,937	-				+1.8
1,418,961	+				+0.2
1,418,981	+				+1.0
1,418,981	+				+0.6
1,418,981	+				-0.4
1,418,981	+				-1.0
1,418,981	+				-2.2
1,418,981	+				+0.1
1,418,981	+				+3.1
1,418,981	+				+1.2
1,418,981	+				-0.1
1,418,981	+				+0.8
1,418,981	+				+0.8
1,418,981	+				+0.0
1,418,981	+				-1.5
1,418,981	+				-0.0
1,418,981	+				-3.3
1,418,981	+				-2.0
1,418,982	-				-0.7
1,418,982	-				+0.3
1,418,982	-				+0.2
1,418,982	-				-0.1
1,418,982	-				-1.1
1,418,982	-				-0.3
1,418,982	-				-2.0
1,418,982	-				+0.3
1,418,982	-				-0.3
1,418,982	-				-0.3
1,418,982	-				-0.5
1,418,982	-				+1.0
1,418,982	-				-2.0
1,418,982	-				-0.4
1,418,982	-				+1.0
1,418,982	-				+1.0
1,418,982	-				+0.6
1,418,982	-				-0.7
1,419,028	-				-0.2
1,419,084	+				-2.1
1,419,098	+				+0.1
1,419,098	+				-2.8
1,419,098	+				+0.6
1,419,098	+				-1.0
1,419,098	+				+0.5
1,419,098	+				+0.3
1,419,098	+				+0.7
1,419,099	-				+0.1
1,419,099	-				+1.2
1,419,099	-				+0.0
1,419,099	-				-1.8
1,419,099	-				+1.6
1,419,099	-				-0.7
1,419,099	-				-0.1
1,419,099	-				-0.9
1,419,099	-				-0.4
1,419,099	-				-0.1
1,419,099	-				+0.7
1,419,099	-				-0.3
1,419,109	+				+1.3
1,419,117	+				-0.1
1,419,117	+				+1.3
1,419,117	+				+0.4
1,419,117	+				-0.6
1,419,117	+				+0.2
1,419,117	+				+0.7
1,419,117	+				-1.9
1,419,117	+				+1.1
1,419,117	+				+0.1
1,419,117	+				+0.1
1,419,117	+				+0.8
1,419,117	+				-2.0
1,419,117	+				-0.0
1,419,118	-				-1.4
1,419,118	-				+0.7
1,419,118	-				+0.1
1,419,118	-				-1.1
1,419,118	-				+0.7
1,419,118	-				-1.6
1,419,118	-				-1.2
1,419,118	-				-1.0
1,419,118	-				-0.1
1,419,118	-				+0.2
1,419,118	-				+1.3
1,419,118	-				-0.4
1,419,118	-				+0.7
1,419,118	-				-0.3
1,419,118	-				-3.3
1,419,121	+				-1.0
1,419,121	+				-2.6
1,419,121	+				-0.9
1,419,121	+				+0.9
1,419,122	-				-0.7
1,419,122	-				+0.4
1,419,122	-				-0.1
1,419,122	-				-1.7
1,419,122	-				-0.9
1,419,122	-				-0.6
1,419,122	-				-0.1
1,419,126	+				-1.5
1,419,126	+				-0.5
1,419,126	+				-0.0
1,419,126	+				+0.9
1,419,126	+				-1.9
1,419,127	-				-1.0
1,419,127	-				-0.6
1,419,127	-				-2.8
1,419,140	+				-3.4
1,419,140	+				+1.2
1,419,140	+				+1.1
1,419,141	-				-0.4
1,419,141	-				-1.4
1,419,143	+				+0.1
1,419,143	+				+0.4
1,419,143	+				+0.6
1,419,143	+				+0.2
1,419,143	+				-0.9
1,419,143	+				+0.4
1,419,143	+				-2.1
1,419,143	+				+1.2
1,419,143	+				-0.6
1,419,144	-				-0.4
1,419,144	-				-1.1
1,419,144	-				+0.2
1,419,148	-				-0.1
1,419,148	-				+0.7
1,419,199	-				-0.5
1,419,199	-				-0.1
1,419,219	+				-0.0
1,419,219	+				-0.3
1,419,219	+				-1.8
1,419,219	+				-0.4
1,419,219	+				-0.9
1,419,219	+				+0.3
1,419,219	+				+1.7
1,419,219	+				-0.5
1,419,219	+				+0.3
1,419,219	+				+1.8
1,419,219	+				+0.9
1,419,219	+				-0.6
1,419,220	-				+0.6
1,419,220	-				-1.3
1,419,220	-				+0.6
1,419,220	-				+0.3
1,419,220	-				+0.2
1,419,220	-				-0.6
1,419,220	-				+0.3
1,419,295	+				+0.5
1,419,295	+				-0.1
1,419,295	+				-2.3
1,419,296	-				+1.8
1,419,296	-				-2.4
1,419,298	+				-1.0
1,419,298	+				+0.1
1,419,298	+				+0.4
1,419,298	+				-0.1
1,419,298	+				+0.9
1,419,299	-				-0.9
1,419,299	-				+2.3
1,419,544	+				+0.8
1,419,544	+				-2.5
1,419,544	+				+0.9
1,419,545	-				+0.7
1,419,545	-				-1.4
1,419,551	-				+0.2
1,419,551	-				+2.2
1,419,644	-				-1.1
1,419,662	-				-0.4
1,419,663	+				+0.1
1,419,663	+				-0.1
1,419,664	-				-0.6
1,419,664	-				+1.3
1,419,667	+				-2.7
1,419,667	+				+0.4
1,419,668	-				+0.0
1,419,668	-				-0.7
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