Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3117 and GFF3118 overlap by 14 nucleotides GFF3118 and GFF3119 overlap by 4 nucleotides
GFF3117 - 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase, at 64,348 to 65,595
GFF3117
GFF3118 - hypothetical protein, at 65,582 to 66,745
GFF3118
GFF3119 - hypothetical protein, at 66,742 to 69,072
GFF3119
Position (kb) 65
66
67 Strain fitness (log2 ratio) -2
-1
0
1 at 65.337 kb on - strand, within GFF3117 at 65.455 kb on + strand, within GFF3117 at 65.533 kb on - strand at 65.732 kb on + strand, within GFF3118 at 65.732 kb on + strand, within GFF3118 at 66.084 kb on + strand, within GFF3118 at 66.085 kb on - strand, within GFF3118 at 66.085 kb on - strand, within GFF3118 at 66.321 kb on + strand, within GFF3118 at 66.322 kb on - strand, within GFF3118 at 66.322 kb on - strand, within GFF3118 at 66.322 kb on - strand, within GFF3118 at 66.322 kb on - strand, within GFF3118 at 66.327 kb on + strand, within GFF3118 at 66.328 kb on - strand, within GFF3118 at 66.408 kb on + strand, within GFF3118 at 66.540 kb on + strand, within GFF3118 at 66.540 kb on + strand, within GFF3118 at 66.541 kb on - strand, within GFF3118 at 66.612 kb on + strand, within GFF3118 at 66.612 kb on + strand, within GFF3118 at 66.613 kb on - strand, within GFF3118 at 66.647 kb on + strand at 66.853 kb on - strand at 66.922 kb on + strand at 66.922 kb on + strand at 67.535 kb on + strand, within GFF3119
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 65,337 - GFF3117 0.79 -0.4 65,455 + GFF3117 0.89 +0.7 65,533 - -0.4 65,732 + GFF3118 0.13 -0.3 65,732 + GFF3118 0.13 +0.4 66,084 + GFF3118 0.43 +1.2 66,085 - GFF3118 0.43 +0.5 66,085 - GFF3118 0.43 +0.8 66,321 + GFF3118 0.63 +0.5 66,322 - GFF3118 0.64 +0.2 66,322 - GFF3118 0.64 +0.1 66,322 - GFF3118 0.64 +0.7 66,322 - GFF3118 0.64 -0.9 66,327 + GFF3118 0.64 -0.3 66,328 - GFF3118 0.64 -0.9 66,408 + GFF3118 0.71 +0.7 66,540 + GFF3118 0.82 +1.0 66,540 + GFF3118 0.82 -0.2 66,541 - GFF3118 0.82 -0.2 66,612 + GFF3118 0.88 +0.8 66,612 + GFF3118 0.88 -0.5 66,613 - GFF3118 0.89 -1.9 66,647 + +0.2 66,853 - +0.8 66,922 + +1.1 66,922 + +0.7 67,535 + GFF3119 0.34 +0.4
Or see this region's nucleotide sequence