Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2198 and GFF2199 are separated by 460 nucleotides GFF2199 and GFF2200 are separated by 293 nucleotides
GFF2198 - hypothetical protein, at 448,949 to 449,320
GFF2198
GFF2199 - Pca regulon regulatory protein, at 449,781 to 450,623
GFF2199
GFF2200 - 4-hydroxybenzoate transporter PcaK, at 450,917 to 452,263
GFF2200
Position (kb) 449
450
451 Strain fitness (log2 ratio) -2
-1
0
1
2 at 448.802 kb on + strand at 448.803 kb on - strand at 448.833 kb on - strand at 449.067 kb on + strand, within GFF2198 at 449.067 kb on + strand, within GFF2198 at 449.067 kb on + strand, within GFF2198 at 449.067 kb on + strand, within GFF2198 at 449.068 kb on - strand, within GFF2198 at 449.068 kb on - strand, within GFF2198 at 449.068 kb on - strand, within GFF2198 at 449.088 kb on + strand, within GFF2198 at 449.100 kb on + strand, within GFF2198 at 449.100 kb on + strand, within GFF2198 at 449.100 kb on + strand, within GFF2198 at 449.100 kb on + strand, within GFF2198 at 449.100 kb on + strand, within GFF2198 at 449.100 kb on + strand, within GFF2198 at 449.101 kb on - strand, within GFF2198 at 449.101 kb on - strand, within GFF2198 at 449.101 kb on - strand, within GFF2198 at 449.101 kb on - strand, within GFF2198 at 449.101 kb on - strand, within GFF2198 at 449.101 kb on - strand, within GFF2198 at 449.101 kb on - strand, within GFF2198 at 449.120 kb on + strand, within GFF2198 at 449.121 kb on - strand, within GFF2198 at 449.155 kb on + strand, within GFF2198 at 449.155 kb on + strand, within GFF2198 at 449.156 kb on - strand, within GFF2198 at 449.156 kb on - strand, within GFF2198 at 449.161 kb on + strand, within GFF2198 at 449.161 kb on + strand, within GFF2198 at 449.162 kb on - strand, within GFF2198 at 449.177 kb on + strand, within GFF2198 at 449.177 kb on + strand, within GFF2198 at 449.428 kb on - strand at 449.451 kb on + strand at 449.452 kb on - strand at 449.452 kb on - strand at 449.452 kb on - strand at 449.452 kb on - strand at 449.452 kb on - strand at 449.452 kb on - strand at 449.453 kb on + strand at 449.454 kb on - strand at 449.476 kb on - strand at 449.476 kb on - strand at 449.489 kb on + strand at 449.489 kb on + strand at 449.544 kb on + strand at 449.544 kb on + strand at 449.544 kb on + strand at 449.544 kb on + strand at 449.545 kb on - strand at 449.545 kb on - strand at 449.545 kb on - strand at 449.545 kb on - strand at 449.551 kb on - strand at 449.564 kb on + strand at 449.565 kb on - strand at 449.565 kb on - strand at 449.565 kb on - strand at 449.593 kb on + strand at 449.593 kb on + strand at 449.594 kb on - strand at 449.606 kb on + strand at 449.606 kb on + strand at 449.606 kb on + strand at 449.606 kb on + strand at 449.606 kb on + strand at 449.606 kb on + strand at 449.606 kb on + strand at 449.607 kb on - strand at 449.607 kb on - strand at 449.607 kb on - strand at 449.607 kb on - strand at 449.607 kb on - strand at 449.748 kb on + strand at 449.748 kb on + strand at 450.024 kb on + strand, within GFF2199 at 450.048 kb on + strand, within GFF2199 at 450.049 kb on - strand, within GFF2199 at 450.049 kb on - strand, within GFF2199 at 450.049 kb on - strand, within GFF2199 at 450.087 kb on + strand, within GFF2199 at 450.087 kb on + strand, within GFF2199 at 450.088 kb on - strand, within GFF2199 at 450.088 kb on - strand, within GFF2199 at 450.088 kb on - strand, within GFF2199 at 450.088 kb on - strand, within GFF2199 at 450.127 kb on - strand, within GFF2199 at 450.127 kb on - strand, within GFF2199 at 450.137 kb on + strand, within GFF2199 at 450.138 kb on - strand, within GFF2199 at 450.138 kb on - strand, within GFF2199 at 450.138 kb on - strand, within GFF2199 at 450.198 kb on + strand, within GFF2199 at 450.198 kb on + strand, within GFF2199 at 450.198 kb on + strand, within GFF2199 at 450.198 kb on + strand, within GFF2199 at 450.198 kb on + strand, within GFF2199 at 450.199 kb on - strand, within GFF2199 at 450.199 kb on - strand, within GFF2199 at 450.199 kb on - strand, within GFF2199 at 450.199 kb on - strand, within GFF2199 at 450.199 kb on - strand, within GFF2199 at 450.199 kb on - strand, within GFF2199 at 450.200 kb on + strand, within GFF2199 at 450.330 kb on + strand, within GFF2199 at 450.330 kb on + strand, within GFF2199 at 450.331 kb on - strand, within GFF2199 at 450.331 kb on - strand, within GFF2199 at 450.378 kb on - strand, within GFF2199 at 450.483 kb on + strand, within GFF2199 at 450.637 kb on + strand at 450.688 kb on + strand at 450.688 kb on + strand at 450.688 kb on + strand at 450.688 kb on + strand at 450.689 kb on - strand at 450.749 kb on + strand at 450.749 kb on + strand at 450.750 kb on - strand at 450.752 kb on + strand at 450.752 kb on + strand at 450.752 kb on + strand at 450.752 kb on + strand at 450.752 kb on + strand at 450.753 kb on - strand at 450.753 kb on - strand at 450.753 kb on - strand at 450.798 kb on + strand at 450.799 kb on - strand at 450.799 kb on - strand at 450.838 kb on + strand at 450.839 kb on - strand at 450.839 kb on - strand at 450.839 kb on - strand at 450.848 kb on + strand at 450.848 kb on + strand at 450.848 kb on + strand at 450.849 kb on - strand at 450.849 kb on - strand at 450.849 kb on - strand at 450.849 kb on - strand at 450.849 kb on - strand at 450.849 kb on - strand at 450.849 kb on - strand at 450.916 kb on - strand at 450.916 kb on - strand at 450.943 kb on + strand at 450.943 kb on + strand at 450.944 kb on - strand at 451.030 kb on - strand at 451.044 kb on + strand at 451.045 kb on - strand at 451.045 kb on - strand at 451.045 kb on - strand at 451.144 kb on + strand, within GFF2200 at 451.145 kb on - strand, within GFF2200 at 451.254 kb on - strand, within GFF2200 at 451.349 kb on + strand, within GFF2200 at 451.349 kb on + strand, within GFF2200 at 451.350 kb on - strand, within GFF2200 at 451.350 kb on - strand, within GFF2200 at 451.350 kb on - strand, within GFF2200 at 451.513 kb on - strand, within GFF2200 at 451.513 kb on - strand, within GFF2200 at 451.544 kb on + strand, within GFF2200 at 451.545 kb on - strand, within GFF2200 at 451.545 kb on - strand, within GFF2200 at 451.578 kb on + strand, within GFF2200
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 448,802 + +0.8 448,803 - +1.0 448,833 - +0.8 449,067 + GFF2198 0.32 -0.6 449,067 + GFF2198 0.32 +0.4 449,067 + GFF2198 0.32 +0.6 449,067 + GFF2198 0.32 +1.6 449,068 - GFF2198 0.32 +0.8 449,068 - GFF2198 0.32 +1.2 449,068 - GFF2198 0.32 +1.8 449,088 + GFF2198 0.37 +0.7 449,100 + GFF2198 0.41 -0.3 449,100 + GFF2198 0.41 -0.4 449,100 + GFF2198 0.41 +0.7 449,100 + GFF2198 0.41 +1.2 449,100 + GFF2198 0.41 -0.1 449,100 + GFF2198 0.41 -1.3 449,101 - GFF2198 0.41 -1.1 449,101 - GFF2198 0.41 +0.7 449,101 - GFF2198 0.41 +0.7 449,101 - GFF2198 0.41 +0.0 449,101 - GFF2198 0.41 +0.7 449,101 - GFF2198 0.41 -0.1 449,101 - GFF2198 0.41 -1.7 449,120 + GFF2198 0.46 +0.0 449,121 - GFF2198 0.46 -0.4 449,155 + GFF2198 0.55 -0.5 449,155 + GFF2198 0.55 -0.7 449,156 - GFF2198 0.56 -0.7 449,156 - GFF2198 0.56 +0.8 449,161 + GFF2198 0.57 -1.6 449,161 + GFF2198 0.57 -2.0 449,162 - GFF2198 0.57 +1.1 449,177 + GFF2198 0.61 +0.4 449,177 + GFF2198 0.61 +0.9 449,428 - +1.1 449,451 + -0.1 449,452 - -0.2 449,452 - +0.3 449,452 - -0.4 449,452 - -2.2 449,452 - -0.2 449,452 - +0.1 449,453 + +0.3 449,454 - +0.9 449,476 - -0.4 449,476 - -0.5 449,489 + -0.8 449,489 + -0.8 449,544 + -0.4 449,544 + -0.1 449,544 + +0.4 449,544 + -0.6 449,545 - +1.1 449,545 - +0.3 449,545 - +0.5 449,545 - +0.0 449,551 - +0.6 449,564 + +0.4 449,565 - +0.3 449,565 - -0.5 449,565 - +0.9 449,593 + +0.9 449,593 + -1.2 449,594 - +1.3 449,606 + -0.6 449,606 + +0.8 449,606 + +0.0 449,606 + -2.1 449,606 + -1.6 449,606 + -0.4 449,606 + +1.8 449,607 - -0.9 449,607 - -0.1 449,607 - +0.1 449,607 - +0.1 449,607 - +0.3 449,748 + -0.8 449,748 + -0.8 450,024 + GFF2199 0.29 -0.2 450,048 + GFF2199 0.32 -0.5 450,049 - GFF2199 0.32 +0.0 450,049 - GFF2199 0.32 -1.4 450,049 - GFF2199 0.32 -0.6 450,087 + GFF2199 0.36 -0.3 450,087 + GFF2199 0.36 -0.3 450,088 - GFF2199 0.36 -0.4 450,088 - GFF2199 0.36 +1.1 450,088 - GFF2199 0.36 +0.3 450,088 - GFF2199 0.36 -0.4 450,127 - GFF2199 0.41 -0.7 450,127 - GFF2199 0.41 +0.4 450,137 + GFF2199 0.42 -0.8 450,138 - GFF2199 0.42 +1.2 450,138 - GFF2199 0.42 +0.2 450,138 - GFF2199 0.42 +0.5 450,198 + GFF2199 0.49 -0.4 450,198 + GFF2199 0.49 -0.6 450,198 + GFF2199 0.49 -0.1 450,198 + GFF2199 0.49 -0.0 450,198 + GFF2199 0.49 -1.3 450,199 - GFF2199 0.50 +0.3 450,199 - GFF2199 0.50 -0.2 450,199 - GFF2199 0.50 -0.4 450,199 - GFF2199 0.50 +1.2 450,199 - GFF2199 0.50 -0.1 450,199 - GFF2199 0.50 +0.2 450,200 + GFF2199 0.50 -0.7 450,330 + GFF2199 0.65 -0.7 450,330 + GFF2199 0.65 -1.2 450,331 - GFF2199 0.65 -0.7 450,331 - GFF2199 0.65 +1.8 450,378 - GFF2199 0.71 -0.7 450,483 + GFF2199 0.83 -1.2 450,637 + -0.2 450,688 + +1.1 450,688 + -0.2 450,688 + -1.1 450,688 + -0.6 450,689 - -0.0 450,749 + -0.5 450,749 + +0.8 450,750 - +0.3 450,752 + +0.4 450,752 + +0.3 450,752 + -0.3 450,752 + +2.0 450,752 + +0.0 450,753 - -0.3 450,753 - +0.0 450,753 - +0.2 450,798 + -0.9 450,799 - +0.6 450,799 - -0.8 450,838 + +0.6 450,839 - +1.3 450,839 - +0.2 450,839 - +0.4 450,848 + -0.6 450,848 + -0.3 450,848 + -0.5 450,849 - -1.0 450,849 - -0.3 450,849 - -1.5 450,849 - -0.0 450,849 - -1.4 450,849 - -0.3 450,849 - +1.4 450,916 - -0.7 450,916 - -0.4 450,943 + +0.3 450,943 + +0.6 450,944 - +0.6 451,030 - +0.2 451,044 + -1.7 451,045 - -0.8 451,045 - +0.2 451,045 - -0.6 451,144 + GFF2200 0.17 +0.2 451,145 - GFF2200 0.17 -0.2 451,254 - GFF2200 0.25 +1.3 451,349 + GFF2200 0.32 -0.3 451,349 + GFF2200 0.32 -1.5 451,350 - GFF2200 0.32 -0.5 451,350 - GFF2200 0.32 +0.5 451,350 - GFF2200 0.32 +0.3 451,513 - GFF2200 0.44 +0.3 451,513 - GFF2200 0.44 -1.6 451,544 + GFF2200 0.47 -0.1 451,545 - GFF2200 0.47 +0.0 451,545 - GFF2200 0.47 +0.5 451,578 + GFF2200 0.49 +1.2
Or see this region's nucleotide sequence