Strain Fitness in Escherichia coli ECRC101 around MCAODC_26695

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
2,053,458	+	citT	MCAODC_26690	0.41	+0.6
2,053,458	+	citT	MCAODC_26690	0.41	-1.0
2,053,458	+	citT	MCAODC_26690	0.41	+0.9
2,053,458	+	citT	MCAODC_26690	0.41	-0.6
2,053,459	-	citT	MCAODC_26690	0.41	-0.6
2,053,462	-	citT	MCAODC_26690	0.41	+0.5
2,053,551	+	citT	MCAODC_26690	0.47	-0.1
2,053,551	+	citT	MCAODC_26690	0.47	+0.7
2,053,594	-	citT	MCAODC_26690	0.50	+0.7
2,053,602	+	citT	MCAODC_26690	0.51	+0.3
2,053,602	+	citT	MCAODC_26690	0.51	-1.3
2,053,603	-	citT	MCAODC_26690	0.51	-1.3
2,053,603	-	citT	MCAODC_26690	0.51	+0.3
2,053,603	-	citT	MCAODC_26690	0.51	-1.4
2,053,624	+	citT	MCAODC_26690	0.52	+1.7
2,053,625	-	citT	MCAODC_26690	0.52	+1.3
2,053,625	-	citT	MCAODC_26690	0.52	-1.2
2,053,634	-	citT	MCAODC_26690	0.53	+0.9
2,053,688	+	citT	MCAODC_26690	0.57	-0.4
2,053,752	-	citT	MCAODC_26690	0.61	+0.2
2,053,788	+	citT	MCAODC_26690	0.63	-0.5
2,053,863	+	citT	MCAODC_26690	0.69	+1.7
2,053,965	+	citT	MCAODC_26690	0.76	-0.1
2,053,966	-	citT	MCAODC_26690	0.76	+1.3
2,053,966	-	citT	MCAODC_26690	0.76	-0.3
2,054,006	+	citT	MCAODC_26690	0.78	-1.1
2,054,006	+	citT	MCAODC_26690	0.78	-1.6
2,054,023	+	citT	MCAODC_26690	0.80	-0.6
2,054,024	-	citT	MCAODC_26690	0.80	+0.4
2,054,035	+	citT	MCAODC_26690	0.80	+0.4
2,054,035	+	citT	MCAODC_26690	0.80	-0.3
2,054,035	+	citT	MCAODC_26690	0.80	-1.0
2,054,035	+	citT	MCAODC_26690	0.80	+0.2
2,054,036	-	citT	MCAODC_26690	0.80	+0.4
2,054,179	+				+1.0
2,054,206	+				-0.0
2,054,218	+				-0.5
2,054,236	+				+0.2
2,054,269	+				+0.7
2,054,270	-				+2.7
2,054,270	-				+0.9
2,054,270	-				-0.3
2,054,277	+				+0.5
2,054,277	+				-1.6
2,054,277	+				-0.9
2,054,277	+				-0.1
2,054,278	-				+0.0
2,054,278	-				+0.4
2,054,320	+				-0.6
2,054,320	+				+0.7
2,054,323	+				-0.8
2,054,323	+				+0.4
2,054,323	+				+1.0
2,054,324	-				+2.7
2,054,366	-				-0.7
2,054,395	-				+2.0
2,054,397	+				+1.7
2,054,397	+				+0.3
2,054,401	+				-0.5
2,054,401	+				+0.6
2,054,402	-				+0.6
2,054,402	-				-0.2
2,054,402	-				+2.3
2,054,404	+				+1.7
2,054,404	+				+0.2
2,054,405	-				+1.0
2,054,405	-				+0.3
2,054,405	-				-0.5
2,054,405	-				+0.7
2,054,405	-				+0.2
2,054,405	-				-0.3
2,054,405	-				+0.2
2,054,413	+				-0.3
2,054,413	+				+0.6
2,054,413	+				+0.2
2,054,414	-				-0.2
2,054,414	-				-1.0
2,054,417	+				+0.3
2,054,417	+				-0.5
2,054,418	-				-1.4
2,054,435	+				+0.2
2,054,453	+				+1.4
2,054,544	+	rna	MCAODC_26695	0.13	+1.4
2,054,545	-	rna	MCAODC_26695	0.14	+0.7
2,054,545	-	rna	MCAODC_26695	0.14	+0.7
2,054,545	-	rna	MCAODC_26695	0.14	+0.7
2,054,545	-	rna	MCAODC_26695	0.14	-0.3
2,054,665	+	rna	MCAODC_26695	0.28	-0.1
2,054,665	+	rna	MCAODC_26695	0.28	-0.2
2,054,665	+	rna	MCAODC_26695	0.28	-0.8
2,054,666	-	rna	MCAODC_26695	0.29	-1.3
2,054,666	-	rna	MCAODC_26695	0.29	+1.7
2,054,816	-	rna	MCAODC_26695	0.47	-0.4
2,054,835	-	rna	MCAODC_26695	0.49	+1.3
2,054,839	+	rna	MCAODC_26695	0.50	+0.2
2,054,893	-	rna	MCAODC_26695	0.57	+0.7
2,054,934	+	rna	MCAODC_26695	0.62	+0.1
2,055,007	-	rna	MCAODC_26695	0.71	+1.5
2,055,084	-	rna	MCAODC_26695	0.80	-0.9
2,055,084	-	rna	MCAODC_26695	0.80	+0.4
2,055,089	-	rna	MCAODC_26695	0.81	+1.0
2,055,089	-	rna	MCAODC_26695	0.81	+0.3
2,055,102	-	rna	MCAODC_26695	0.83	+1.4
2,055,112	-	rna	MCAODC_26695	0.84	+0.7
2,055,112	-	rna	MCAODC_26695	0.84	-2.0
2,055,112	-	rna	MCAODC_26695	0.84	+0.0
2,055,200	+				+0.7
2,055,200	+				+0.7
2,055,240	+				-2.4
2,055,241	-				-1.2
2,055,241	-				+0.3
2,055,254	-				-0.1
2,055,265	+				-1.0
2,055,279	+				-0.7
2,055,293	+				-0.3
2,055,302	+				-1.4
2,055,306	+				+0.2
2,055,307	-				+0.3
2,055,307	-				-1.1
2,055,374	-				+0.7
2,055,374	-				-0.7
2,055,388	+				+0.2
2,055,389	-				-1.4
2,055,389	-				+3.0
2,055,427	+				+0.2
2,055,433	+				-0.3
2,055,433	+				-0.7
2,055,434	-				-1.1
2,055,487	-				-0.7
2,055,487	-				-1.5
2,055,487	-				+1.1
2,055,544	+	rnk	MCAODC_26700	0.18	+1.3
2,055,726	+	rnk	MCAODC_26700	0.62	-1.6
2,055,752	+	rnk	MCAODC_26700	0.68	-1.7
2,055,847	+				-0.5
2,055,871	+				+0.6
2,055,893	-				-0.2
2,055,893	-				-1.1
2,055,893	-				-1.8
2,055,901	+				+2.1
2,055,901	+				+0.2
2,056,036	-	yldA	MCAODC_26705	0.18	+0.2
2,056,036	-	yldA	MCAODC_26705	0.18	+1.2
2,056,058	+	yldA	MCAODC_26705	0.42	+2.2
2,056,116	+				-1.4
2,056,117	-				+1.7
2,056,117	-				+0.4
2,056,117	-				+0.3
2,056,206	-				-0.2