Strain Fitness in Escherichia coli ECRC101 around MCAODC_14615

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
2,878,237	-	preT	MCAODC_14605	0.63	-0.9
2,878,251	+	preT	MCAODC_14605	0.64	-0.4
2,878,448	+	preT	MCAODC_14605	0.80	+0.1
2,878,449	-	preT	MCAODC_14605	0.80	-1.9
2,878,610	+				-0.0
2,878,611	-				-0.7
2,878,611	-				-0.5
2,878,712	-				+0.1
2,878,712	-				+0.5
2,878,741	+				-0.9
2,878,837	-				-0.4
2,878,901	+				+1.6
2,878,945	+	yeiS	MCAODC_14610	0.24	+0.2
2,878,946	-	yeiS	MCAODC_14610	0.25	+1.1
2,878,946	-	yeiS	MCAODC_14610	0.25	+0.2
2,878,997	-	yeiS	MCAODC_14610	0.46	+0.2
2,879,326	+	sanA	MCAODC_14615	0.27	+2.2
2,879,455	+	sanA	MCAODC_14615	0.45	+1.6
2,879,490	+	sanA	MCAODC_14615	0.50	+1.6
2,879,599	-	sanA	MCAODC_14615	0.65	-2.3
2,879,599	-	sanA	MCAODC_14615	0.65	-0.4
2,879,618	-	sanA	MCAODC_14615	0.68	-0.4
2,879,663	-	sanA	MCAODC_14615	0.74	-0.4
2,879,742	+	sanA	MCAODC_14615	0.85	+0.4
2,879,747	-	sanA	MCAODC_14615	0.86	+0.3
2,879,747	-	sanA	MCAODC_14615	0.86	-0.6
2,879,747	-	sanA	MCAODC_14615	0.86	+1.6
2,879,748	+	sanA	MCAODC_14615	0.86	-0.2
2,879,748	+	sanA	MCAODC_14615	0.86	-1.5
2,879,748	+	sanA	MCAODC_14615	0.86	+0.1
2,879,749	-	sanA	MCAODC_14615	0.86	-0.5
2,879,749	-	sanA	MCAODC_14615	0.86	-1.2
2,879,820	-				+0.8
2,879,865	-				+1.6
2,879,999	+				-0.0
2,880,146	-	cdd	MCAODC_14620	0.17	-0.2
2,880,151	+	cdd	MCAODC_14620	0.17	+0.5
2,880,152	-	cdd	MCAODC_14620	0.17	-0.4
2,880,152	-	cdd	MCAODC_14620	0.17	+0.6
2,880,203	+	cdd	MCAODC_14620	0.23	-0.1
2,880,204	-	cdd	MCAODC_14620	0.23	+0.6
2,880,204	-	cdd	MCAODC_14620	0.23	+2.6
2,880,261	+	cdd	MCAODC_14620	0.30	-0.4
2,880,261	+	cdd	MCAODC_14620	0.30	+1.4
2,880,367	-	cdd	MCAODC_14620	0.42	+0.6
2,880,404	+	cdd	MCAODC_14620	0.46	+1.2
2,880,445	-	cdd	MCAODC_14620	0.51	-1.5
2,880,507	-	cdd	MCAODC_14620	0.58	+1.0
2,880,507	-	cdd	MCAODC_14620	0.58	+0.2
2,880,507	-	cdd	MCAODC_14620	0.58	-0.2
2,880,669	+	cdd	MCAODC_14620	0.76	-0.9
2,880,670	-	cdd	MCAODC_14620	0.76	+0.5
2,880,670	-	cdd	MCAODC_14620	0.76	+0.1
2,880,715	+	cdd	MCAODC_14620	0.81	-0.1
2,880,800	+				+0.8
2,880,801	-				+0.1
2,880,801	-				-1.0