Strain Fitness in Escherichia coli ECRC101 around MCAODC_14565

Experiment: Bas09

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyeiG and folE are separated by 257 nucleotidesfolE and yeiB are separated by 16 nucleotides MCAODC_14560: yeiG - S-formylglutathione hydrolase, at 2,867,981 to 2,868,817 yeiG MCAODC_14565: folE - GTP cyclohydrolase I FolE, at 2,869,075 to 2,869,743 folE MCAODC_14570: yeiB - Uncharacterized protein YeiB, at 2,869,760 to 2,870,917 yeiB Position (kb) 2869 2870Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2868.117 kb on - strand, within yeiGat 2868.204 kb on + strand, within yeiGat 2868.204 kb on + strand, within yeiGat 2868.205 kb on - strand, within yeiGat 2868.205 kb on - strand, within yeiGat 2868.205 kb on - strand, within yeiGat 2868.205 kb on - strand, within yeiGat 2868.254 kb on + strand, within yeiGat 2868.333 kb on + strand, within yeiGat 2868.334 kb on - strand, within yeiGat 2868.334 kb on - strand, within yeiGat 2868.334 kb on - strand, within yeiGat 2868.359 kb on - strand, within yeiGat 2868.460 kb on - strand, within yeiGat 2868.460 kb on - strand, within yeiGat 2868.460 kb on - strand, within yeiGat 2868.460 kb on - strand, within yeiGat 2868.465 kb on + strand, within yeiGat 2868.465 kb on + strand, within yeiGat 2868.465 kb on + strand, within yeiGat 2868.466 kb on - strand, within yeiGat 2868.466 kb on - strand, within yeiGat 2868.466 kb on - strand, within yeiGat 2868.510 kb on + strand, within yeiGat 2868.593 kb on + strand, within yeiGat 2868.747 kb on - strandat 2868.858 kb on - strandat 2868.858 kb on - strandat 2868.865 kb on - strandat 2868.882 kb on + strandat 2868.948 kb on - strandat 2868.951 kb on + strandat 2868.951 kb on + strandat 2868.955 kb on + strandat 2868.975 kb on + strandat 2869.022 kb on + strandat 2869.701 kb on + strandat 2869.746 kb on + strandat 2869.746 kb on + strandat 2869.822 kb on - strandat 2869.822 kb on - strandat 2869.857 kb on - strandat 2869.885 kb on + strand, within yeiBat 2869.886 kb on - strand, within yeiBat 2869.886 kb on - strand, within yeiBat 2870.174 kb on + strand, within yeiBat 2870.265 kb on + strand, within yeiBat 2870.266 kb on - strand, within yeiBat 2870.311 kb on + strand, within yeiBat 2870.312 kb on - strand, within yeiBat 2870.341 kb on - strand, within yeiBat 2870.361 kb on - strand, within yeiBat 2870.439 kb on + strand, within yeiBat 2870.440 kb on - strand, within yeiBat 2870.470 kb on - strand, within yeiBat 2870.554 kb on - strand, within yeiBat 2870.615 kb on + strand, within yeiBat 2870.645 kb on - strand, within yeiBat 2870.694 kb on - strand, within yeiBat 2870.694 kb on - strand, within yeiBat 2870.694 kb on - strand, within yeiBat 2870.694 kb on - strand, within yeiBat 2870.698 kb on - strand, within yeiB

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas09
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2,868,117 - yeiG MCAODC_14560 0.16 -2.2
2,868,204 + yeiG MCAODC_14560 0.27 -0.5
2,868,204 + yeiG MCAODC_14560 0.27 -0.2
2,868,205 - yeiG MCAODC_14560 0.27 -1.8
2,868,205 - yeiG MCAODC_14560 0.27 -0.4
2,868,205 - yeiG MCAODC_14560 0.27 -1.0
2,868,205 - yeiG MCAODC_14560 0.27 +0.1
2,868,254 + yeiG MCAODC_14560 0.33 +0.1
2,868,333 + yeiG MCAODC_14560 0.42 -1.8
2,868,334 - yeiG MCAODC_14560 0.42 +0.5
2,868,334 - yeiG MCAODC_14560 0.42 +0.5
2,868,334 - yeiG MCAODC_14560 0.42 +0.1
2,868,359 - yeiG MCAODC_14560 0.45 -0.3
2,868,460 - yeiG MCAODC_14560 0.57 +0.1
2,868,460 - yeiG MCAODC_14560 0.57 +0.2
2,868,460 - yeiG MCAODC_14560 0.57 -0.1
2,868,460 - yeiG MCAODC_14560 0.57 +1.0
2,868,465 + yeiG MCAODC_14560 0.58 +0.9
2,868,465 + yeiG MCAODC_14560 0.58 -0.7
2,868,465 + yeiG MCAODC_14560 0.58 +0.6
2,868,466 - yeiG MCAODC_14560 0.58 -1.2
2,868,466 - yeiG MCAODC_14560 0.58 -0.2
2,868,466 - yeiG MCAODC_14560 0.58 -0.1
2,868,510 + yeiG MCAODC_14560 0.63 +0.0
2,868,593 + yeiG MCAODC_14560 0.73 -0.6
2,868,747 - +0.9
2,868,858 - +0.4
2,868,858 - -0.3
2,868,865 - -0.2
2,868,882 + +0.7
2,868,948 - +1.6
2,868,951 + +1.0
2,868,951 + -0.4
2,868,955 + +0.2
2,868,975 + -0.0
2,869,022 + -0.4
2,869,701 + +1.6
2,869,746 + -0.2
2,869,746 + +0.3
2,869,822 - -0.4
2,869,822 - -0.2
2,869,857 - -3.5
2,869,885 + yeiB MCAODC_14570 0.11 +0.6
2,869,886 - yeiB MCAODC_14570 0.11 +0.6
2,869,886 - yeiB MCAODC_14570 0.11 +0.7
2,870,174 + yeiB MCAODC_14570 0.36 -0.5
2,870,265 + yeiB MCAODC_14570 0.44 +1.0
2,870,266 - yeiB MCAODC_14570 0.44 +1.6
2,870,311 + yeiB MCAODC_14570 0.48 +2.2
2,870,312 - yeiB MCAODC_14570 0.48 -1.1
2,870,341 - yeiB MCAODC_14570 0.50 +0.1
2,870,361 - yeiB MCAODC_14570 0.52 +0.2
2,870,439 + yeiB MCAODC_14570 0.59 +0.8
2,870,440 - yeiB MCAODC_14570 0.59 +0.1
2,870,470 - yeiB MCAODC_14570 0.61 +0.7
2,870,554 - yeiB MCAODC_14570 0.69 -0.1
2,870,615 + yeiB MCAODC_14570 0.74 -0.4
2,870,645 - yeiB MCAODC_14570 0.76 -0.8
2,870,694 - yeiB MCAODC_14570 0.81 -0.2
2,870,694 - yeiB MCAODC_14570 0.81 +0.1
2,870,694 - yeiB MCAODC_14570 0.81 +1.6
2,870,694 - yeiB MCAODC_14570 0.81 +0.1
2,870,698 - yeiB MCAODC_14570 0.81 -0.4

Or see this region's nucleotide sequence