Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeiG and folE are separated by 257 nucleotides folE and yeiB are separated by 16 nucleotides
MCAODC_14560: yeiG - S-formylglutathione hydrolase, at 2,867,981 to 2,868,817
yeiG
MCAODC_14565: folE - GTP cyclohydrolase I FolE, at 2,869,075 to 2,869,743
folE
MCAODC_14570: yeiB - Uncharacterized protein YeiB, at 2,869,760 to 2,870,917
yeiB
Position (kb)
2869
2870 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2868.117 kb on - strand, within yeiG at 2868.204 kb on + strand, within yeiG at 2868.204 kb on + strand, within yeiG at 2868.205 kb on - strand, within yeiG at 2868.205 kb on - strand, within yeiG at 2868.205 kb on - strand, within yeiG at 2868.205 kb on - strand, within yeiG at 2868.254 kb on + strand, within yeiG at 2868.333 kb on + strand, within yeiG at 2868.334 kb on - strand, within yeiG at 2868.334 kb on - strand, within yeiG at 2868.334 kb on - strand, within yeiG at 2868.359 kb on - strand, within yeiG at 2868.460 kb on - strand, within yeiG at 2868.460 kb on - strand, within yeiG at 2868.460 kb on - strand, within yeiG at 2868.460 kb on - strand, within yeiG at 2868.465 kb on + strand, within yeiG at 2868.465 kb on + strand, within yeiG at 2868.465 kb on + strand, within yeiG at 2868.466 kb on - strand, within yeiG at 2868.466 kb on - strand, within yeiG at 2868.466 kb on - strand, within yeiG at 2868.510 kb on + strand, within yeiG at 2868.593 kb on + strand, within yeiG at 2868.747 kb on - strand at 2868.858 kb on - strand at 2868.858 kb on - strand at 2868.865 kb on - strand at 2868.882 kb on + strand at 2868.948 kb on - strand at 2868.951 kb on + strand at 2868.951 kb on + strand at 2868.955 kb on + strand at 2868.975 kb on + strand at 2869.022 kb on + strand at 2869.701 kb on + strand at 2869.746 kb on + strand at 2869.746 kb on + strand at 2869.822 kb on - strand at 2869.822 kb on - strand at 2869.857 kb on - strand at 2869.885 kb on + strand, within yeiB at 2869.886 kb on - strand, within yeiB at 2869.886 kb on - strand, within yeiB at 2870.174 kb on + strand, within yeiB at 2870.265 kb on + strand, within yeiB at 2870.266 kb on - strand, within yeiB at 2870.311 kb on + strand, within yeiB at 2870.312 kb on - strand, within yeiB at 2870.341 kb on - strand, within yeiB at 2870.361 kb on - strand, within yeiB at 2870.439 kb on + strand, within yeiB at 2870.440 kb on - strand, within yeiB at 2870.470 kb on - strand, within yeiB at 2870.554 kb on - strand, within yeiB at 2870.615 kb on + strand, within yeiB at 2870.645 kb on - strand, within yeiB at 2870.694 kb on - strand, within yeiB at 2870.694 kb on - strand, within yeiB at 2870.694 kb on - strand, within yeiB at 2870.694 kb on - strand, within yeiB at 2870.698 kb on - strand, within yeiB
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 2,868,117 - yeiG MCAODC_14560 0.16 -2.2 2,868,204 + yeiG MCAODC_14560 0.27 -0.5 2,868,204 + yeiG MCAODC_14560 0.27 -0.2 2,868,205 - yeiG MCAODC_14560 0.27 -1.8 2,868,205 - yeiG MCAODC_14560 0.27 -0.4 2,868,205 - yeiG MCAODC_14560 0.27 -1.0 2,868,205 - yeiG MCAODC_14560 0.27 +0.1 2,868,254 + yeiG MCAODC_14560 0.33 +0.1 2,868,333 + yeiG MCAODC_14560 0.42 -1.8 2,868,334 - yeiG MCAODC_14560 0.42 +0.5 2,868,334 - yeiG MCAODC_14560 0.42 +0.5 2,868,334 - yeiG MCAODC_14560 0.42 +0.1 2,868,359 - yeiG MCAODC_14560 0.45 -0.3 2,868,460 - yeiG MCAODC_14560 0.57 +0.1 2,868,460 - yeiG MCAODC_14560 0.57 +0.2 2,868,460 - yeiG MCAODC_14560 0.57 -0.1 2,868,460 - yeiG MCAODC_14560 0.57 +1.0 2,868,465 + yeiG MCAODC_14560 0.58 +0.9 2,868,465 + yeiG MCAODC_14560 0.58 -0.7 2,868,465 + yeiG MCAODC_14560 0.58 +0.6 2,868,466 - yeiG MCAODC_14560 0.58 -1.2 2,868,466 - yeiG MCAODC_14560 0.58 -0.2 2,868,466 - yeiG MCAODC_14560 0.58 -0.1 2,868,510 + yeiG MCAODC_14560 0.63 +0.0 2,868,593 + yeiG MCAODC_14560 0.73 -0.6 2,868,747 - +0.9 2,868,858 - +0.4 2,868,858 - -0.3 2,868,865 - -0.2 2,868,882 + +0.7 2,868,948 - +1.6 2,868,951 + +1.0 2,868,951 + -0.4 2,868,955 + +0.2 2,868,975 + -0.0 2,869,022 + -0.4 2,869,701 + +1.6 2,869,746 + -0.2 2,869,746 + +0.3 2,869,822 - -0.4 2,869,822 - -0.2 2,869,857 - -3.5 2,869,885 + yeiB MCAODC_14570 0.11 +0.6 2,869,886 - yeiB MCAODC_14570 0.11 +0.6 2,869,886 - yeiB MCAODC_14570 0.11 +0.7 2,870,174 + yeiB MCAODC_14570 0.36 -0.5 2,870,265 + yeiB MCAODC_14570 0.44 +1.0 2,870,266 - yeiB MCAODC_14570 0.44 +1.6 2,870,311 + yeiB MCAODC_14570 0.48 +2.2 2,870,312 - yeiB MCAODC_14570 0.48 -1.1 2,870,341 - yeiB MCAODC_14570 0.50 +0.1 2,870,361 - yeiB MCAODC_14570 0.52 +0.2 2,870,439 + yeiB MCAODC_14570 0.59 +0.8 2,870,440 - yeiB MCAODC_14570 0.59 +0.1 2,870,470 - yeiB MCAODC_14570 0.61 +0.7 2,870,554 - yeiB MCAODC_14570 0.69 -0.1 2,870,615 + yeiB MCAODC_14570 0.74 -0.4 2,870,645 - yeiB MCAODC_14570 0.76 -0.8 2,870,694 - yeiB MCAODC_14570 0.81 -0.2 2,870,694 - yeiB MCAODC_14570 0.81 +0.1 2,870,694 - yeiB MCAODC_14570 0.81 +1.6 2,870,694 - yeiB MCAODC_14570 0.81 +0.1 2,870,698 - yeiB MCAODC_14570 0.81 -0.4
Or see this region's nucleotide sequence