Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5682

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
2,702,741	-		GFF5681	0.22	-0.8
2,702,809	-		GFF5681	0.28	+0.4
2,702,809	-		GFF5681	0.28	-1.0
2,702,938	-		GFF5681	0.39	+0.2
2,703,156	+		GFF5681	0.57	+1.1
2,703,157	-		GFF5681	0.57	-0.0
2,703,157	-		GFF5681	0.57	-0.0
2,703,231	+		GFF5681	0.64	+1.9
2,703,300	+		GFF5681	0.69	+1.3
2,703,370	-		GFF5681	0.75	-0.3
2,703,654	+				+0.6
2,703,680	+				+1.8
2,703,681	-				+1.1
2,704,186	-		GFF5682	0.62	+0.8
2,704,249	-		GFF5682	0.70	+0.1
2,704,662	-		GFF5683	0.24	+0.7
2,704,829	+		GFF5683	0.48	-1.4
2,704,830	-		GFF5683	0.48	-0.4
2,704,886	+		GFF5683	0.56	-0.7
2,704,887	-		GFF5683	0.56	-0.2
2,704,934	+		GFF5683	0.63	-0.1
2,704,935	-		GFF5683	0.63	+0.2
2,705,030	+		GFF5683	0.76	-0.4
2,705,031	-		GFF5683	0.77	+0.7
2,705,031	-		GFF5683	0.77	-0.9
2,705,031	-		GFF5683	0.77	+0.1
2,705,151	+				+1.0
2,705,152	-				+0.5
2,705,232	-				-0.2
2,705,262	+				+0.2
2,705,262	+				+0.0
2,705,262	+				-0.7
2,705,263	-				-1.2
2,705,263	-				+0.5
2,705,263	-				-0.5
2,705,263	-				+0.2
2,705,456	+				+0.2