Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5471

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
2,472,807	+		GFF5470	0.38	+1.9
2,472,807	+		GFF5470	0.38	-0.5
2,472,873	+		GFF5470	0.43	+0.3
2,472,874	-		GFF5470	0.43	+0.9
2,472,915	+		GFF5470	0.45	-0.0
2,472,985	-		GFF5470	0.50	+0.3
2,473,084	-		GFF5470	0.56	-0.2
2,473,087	-		GFF5470	0.56	+0.0
2,473,351	-		GFF5470	0.73	-1.0
2,473,437	+		GFF5470	0.79	-0.4
2,473,597	+		GFF5470	0.89	+0.0
2,473,975	-		GFF5471	0.17	-0.9
2,474,023	-		GFF5471	0.20	-0.4
2,474,023	-		GFF5471	0.20	+0.2
2,474,119	-		GFF5471	0.28	-1.4
2,474,119	-		GFF5471	0.28	-1.1
2,474,344	-		GFF5471	0.45	+0.8
2,474,957	+				-0.0
2,474,988	+				+1.7
2,475,194	-				-0.2
2,475,679	+		GFF5472	0.66	-1.7