Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5468

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
2,469,372	+		GFF5466	0.77	+0.0
2,469,373	-		GFF5466	0.77	+0.3
2,469,597	+				-0.3
2,469,955	+		GFF5467	0.50	+0.8
2,470,386	+		GFF5468	0.11	+1.9
2,471,172	+		GFF5468	0.89	+0.3
2,471,172	+		GFF5468	0.89	+0.3
2,471,173	-		GFF5468	0.89	+0.4
2,471,290	+				+0.2
2,471,291	-				+0.1
2,471,291	-				-0.1
2,471,293	+				-0.1
2,471,293	+				+2.0
2,471,293	+				-0.4
2,471,294	-				-0.4
2,471,551	+		GFF5469	0.33	+1.3
2,471,551	+		GFF5469	0.33	+0.1
2,471,551	+		GFF5469	0.33	-0.5
2,471,551	+		GFF5469	0.33	-1.8
2,471,552	-		GFF5469	0.33	-0.1
2,471,729	-		GFF5469	0.55	+0.3
2,471,729	-		GFF5469	0.55	+0.1
2,471,756	-		GFF5469	0.58	-0.7
2,471,807	-		GFF5469	0.65	+1.4
2,471,821	+		GFF5469	0.66	-0.3
2,471,822	-		GFF5469	0.66	-0.6
2,471,827	+		GFF5469	0.67	+0.1
2,471,917	+		GFF5469	0.78	-0.1
2,472,103	+				+0.8