Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5385

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
2,387,721	-		GFF5384	0.85	-0.1
2,388,743	+				-0.1
2,388,743	+				+0.2
2,388,818	+				+1.2
2,388,818	+				+0.8
2,388,818	+				-0.9
2,388,819	-				-0.9
2,388,843	-				-0.1
2,388,879	-				+0.3
2,389,203	-		GFF5386	0.30	+0.5
2,389,716	-		GFF5386	0.65	-0.0