Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5264

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
2,277,947	+		GFF5263	0.17	+1.1
2,277,947	+		GFF5263	0.17	-0.4
2,277,948	-		GFF5263	0.17	-1.4
2,278,452	-		GFF5263	0.73	+0.3
2,278,452	-		GFF5263	0.73	+0.2
2,278,469	+		GFF5263	0.75	+0.9
2,278,470	-		GFF5263	0.75	-0.5
2,278,470	-		GFF5263	0.75	-0.0
2,278,688	+				-0.7
2,278,688	+				-1.3
2,278,688	+				+0.6
2,279,391	+		GFF5265	0.32	+2.2
2,279,391	+		GFF5265	0.32	-0.4
2,279,392	-		GFF5265	0.32	-0.7
2,279,392	-		GFF5265	0.32	-0.3
2,279,466	+		GFF5265	0.43	-0.5
2,279,467	-		GFF5265	0.43	+0.3
2,279,824	+				+0.7
2,279,824	+				-0.1
2,279,832	+				+0.2
2,279,832	+				-1.5
2,279,833	-				+0.1
2,280,088	-		GFF5266	0.12	+0.2
2,280,088	-		GFF5266	0.12	+1.0