Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5128

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
2,139,095	+		GFF5127	0.44	+0.3
2,139,095	+		GFF5127	0.44	-0.3
2,139,095	+		GFF5127	0.44	+0.8
2,139,096	-		GFF5127	0.44	+0.1
2,139,096	-		GFF5127	0.44	+0.4
2,139,713	+		GFF5127	0.85	+0.3
2,139,713	+		GFF5127	0.85	+0.6
2,139,714	-		GFF5127	0.86	+0.5
2,139,725	+		GFF5127	0.86	-0.3
2,139,726	-		GFF5127	0.86	+0.9
2,139,728	+		GFF5127	0.86	+0.1
2,139,728	+		GFF5127	0.86	+0.6
2,139,729	-		GFF5127	0.87	+1.2
2,139,729	-		GFF5127	0.87	+1.8
2,139,729	-		GFF5127	0.87	+0.1
2,140,018	-		GFF5128	0.12	+0.4
2,140,885	+		GFF5129	0.34	-0.3
2,140,885	+		GFF5129	0.34	+0.1
2,140,886	-		GFF5129	0.34	-0.0
2,140,886	-		GFF5129	0.34	-0.7
2,140,978	+		GFF5129	0.44	-0.7
2,140,979	-		GFF5129	0.44	+0.2
2,140,979	-		GFF5129	0.44	-0.5
2,140,979	-		GFF5129	0.44	-0.1
2,140,979	-		GFF5129	0.44	+0.8
2,140,979	-		GFF5129	0.44	+0.4
2,140,999	-		GFF5129	0.46	-0.6
2,141,155	+		GFF5129	0.62	-1.3
2,141,156	-		GFF5129	0.62	+0.9
2,141,284	+		GFF5129	0.75	-2.2