Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4610

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
1,556,047	+				+0.5
1,556,047	+				+0.5
1,556,048	-				+0.7
1,556,079	-				-0.6
1,556,079	-				-0.3
1,556,138	+				-0.6
1,556,138	+				+1.1
1,556,139	-				+0.0
1,556,139	-				-0.2
1,556,148	+				+1.4
1,556,149	-				+1.1
1,556,248	-				+0.0
1,556,333	+				-0.7
1,556,496	+				+0.1
1,556,496	+				-0.0
1,556,497	-				-0.7
1,556,588	+				-0.2
1,556,588	+				-0.6
1,556,588	+				+0.6
1,556,588	+				+0.4
1,556,588	+				-0.9
1,556,588	+				+0.4
1,556,589	-				+0.5
1,556,671	+				-2.5
1,556,671	+				+0.2
1,556,671	+				+1.0
1,556,672	-				+0.2
1,556,672	-				-0.2
1,556,672	-				+0.1
1,556,711	+				+2.2
1,556,712	-				+0.2
1,556,712	-				-0.1
1,556,712	-				-0.2
1,556,714	+				-0.1
1,556,714	+				-0.6
1,556,714	+				-0.1
1,556,715	-				+0.5
1,556,715	-				+0.4
1,556,715	-				-0.5
1,556,715	-				+0.0
1,556,810	+				+0.0
1,556,810	+				-0.3
1,556,810	+				-0.1
1,556,810	+				+0.7
1,556,810	+				-0.6
1,556,810	+				-0.3
1,556,810	+				+0.3
1,556,810	+				-0.2
1,556,811	-				+1.0
1,556,811	-				+0.7
1,556,811	-				-0.6
1,556,811	-				+0.9
1,556,811	-				-0.1
1,556,811	-				+0.2
1,556,870	+				-0.0
1,556,870	+				-1.4
1,556,870	+				-0.6
1,556,871	-				-0.8
1,556,881	+				-0.3
1,556,881	+				-1.9
1,556,881	+				+0.1
1,556,881	+				+0.1
1,556,882	-				+1.1
1,556,940	+				+0.3
1,556,996	+				+0.2
1,556,996	+				+1.6
1,556,997	-				+0.2
1,556,997	-				+0.1
1,556,997	-				-0.5
1,556,997	-				-0.6
1,556,997	-				-0.1
1,556,997	-				-0.2
1,556,997	-				-0.3
1,557,004	+				+0.9
1,557,004	+				-0.3
1,557,004	+				-0.2
1,557,004	+				+0.4
1,557,004	+				-0.7
1,557,004	+				-0.4
1,557,004	+				-0.2
1,557,004	+				+0.4
1,557,004	+				-0.7
1,557,004	+				+0.0
1,557,004	+				-0.2
1,557,004	+				-0.2
1,557,004	+				+0.3
1,557,004	+				+0.1
1,557,004	+				+0.7
1,557,004	+				+0.2
1,557,005	-				-0.4
1,557,005	-				-0.4
1,557,005	-				+0.4
1,557,005	-				+1.1
1,557,005	-				+0.7
1,557,005	-				+0.2
1,557,005	-				-0.2
1,557,161	+		GFF4610	0.70	+0.7
1,557,203	+				-0.1
1,557,204	-				-0.1
1,557,232	+				+0.5
1,557,288	+				+0.4
1,557,288	+				+0.3
1,557,288	+				+0.1
1,557,288	+				-0.5
1,557,288	+				-0.1
1,557,289	-				+0.6
1,557,289	-				-0.5
1,557,302	+				-0.1
1,557,302	+				-0.2
1,557,303	-				+0.9
1,557,303	-				-0.2
1,557,303	-				-1.0
1,557,303	-				+1.7
1,557,342	+				+0.3
1,557,342	+				-0.8
1,557,365	+				-0.2
1,557,366	-				-0.0
1,557,369	+				+0.0
1,557,369	+				-2.2
1,557,369	+				-0.1
1,557,369	+				+0.1
1,557,810	+		GFF4611	0.45	-0.0
1,557,810	+		GFF4611	0.45	-0.1
1,557,810	+		GFF4611	0.45	-0.8
1,557,810	+		GFF4611	0.45	-1.5
1,557,810	+		GFF4611	0.45	+0.2
1,557,810	+		GFF4611	0.45	-0.6
1,557,810	+		GFF4611	0.45	+0.2
1,557,810	+		GFF4611	0.45	-0.4
1,557,811	-		GFF4611	0.46	-1.3
1,557,811	-		GFF4611	0.46	-0.8
1,557,811	-		GFF4611	0.46	+0.4
1,557,811	-		GFF4611	0.46	-0.7
1,557,811	-		GFF4611	0.46	-0.0