Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4592

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
1,536,527	+				+1.2
1,536,598	+				+0.5
1,536,778	+		GFF4591	0.30	+0.6
1,536,779	-		GFF4591	0.30	+0.3
1,536,779	-		GFF4591	0.30	-0.4
1,536,805	+		GFF4591	0.34	+1.1
1,536,913	+		GFF4591	0.49	+0.2
1,536,913	+		GFF4591	0.49	-0.1
1,536,913	+		GFF4591	0.49	+0.2
1,536,913	+		GFF4591	0.49	-0.3
1,536,913	+		GFF4591	0.49	+0.3
1,536,913	+		GFF4591	0.49	-1.4
1,536,913	+		GFF4591	0.49	+0.3
1,536,914	-		GFF4591	0.49	+0.8
1,536,914	-		GFF4591	0.49	-0.3
1,536,914	-		GFF4591	0.49	-0.4
1,536,914	-		GFF4591	0.49	-0.1
1,537,238	-				-0.6
1,537,539	-				+0.5
1,537,539	-				-0.3
1,537,539	-				-0.2
1,537,859	+		GFF4592	0.16	-0.6
1,538,183	+		GFF4592	0.31	-0.3
1,538,183	+		GFF4592	0.31	-1.3
1,538,183	+		GFF4592	0.31	-0.9
1,538,183	+		GFF4592	0.31	-0.8
1,538,184	-		GFF4592	0.31	-2.2
1,538,567	+		GFF4592	0.49	-0.6
1,538,567	+		GFF4592	0.49	-1.0
1,538,609	+		GFF4592	0.51	-1.9
1,538,609	+		GFF4592	0.51	+0.1
1,538,610	-		GFF4592	0.51	-0.8
1,538,610	-		GFF4592	0.51	+0.9
1,538,610	-		GFF4592	0.51	-0.1
1,538,648	+		GFF4592	0.53	+0.0
1,538,648	+		GFF4592	0.53	-0.8
1,538,649	-		GFF4592	0.53	-0.2
1,538,649	-		GFF4592	0.53	-0.9
1,538,649	-		GFF4592	0.53	+0.4
1,539,006	-		GFF4592	0.70	+0.6
1,539,179	+		GFF4592	0.78	-0.1
1,539,180	-		GFF4592	0.78	+0.4
1,539,246	-		GFF4592	0.81	+0.3
1,539,251	+		GFF4592	0.82	-1.1
1,539,251	+		GFF4592	0.82	-0.6
1,539,251	+		GFF4592	0.82	-0.2
1,539,377	+		GFF4592	0.88	+0.0
1,539,377	+		GFF4592	0.88	-0.3
1,539,378	-		GFF4592	0.88	+1.0
1,539,378	-		GFF4592	0.88	-0.6
1,539,378	-		GFF4592	0.88	+0.1
1,539,378	-		GFF4592	0.88	+0.6
1,539,378	-		GFF4592	0.88	-1.3
1,539,452	+				+1.0
1,539,452	+				-0.8
1,539,453	-				+0.7
1,539,500	+				-0.8
1,539,500	+				-0.4
1,539,659	-				+0.2
1,540,005	+		GFF4593	0.28	+0.2
1,540,006	-		GFF4593	0.28	+1.3
1,540,104	+		GFF4593	0.37	-0.5
1,540,146	+		GFF4593	0.40	-1.2
1,540,147	-		GFF4593	0.40	-0.1
1,540,147	-		GFF4593	0.40	+0.4
1,540,147	-		GFF4593	0.40	+1.6
1,540,147	-		GFF4593	0.40	+1.1
1,540,176	+		GFF4593	0.43	+0.0
1,540,177	-		GFF4593	0.43	+0.3
1,540,597	+		GFF4593	0.79	+0.2