Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4565

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
1,505,870	+				+0.3
1,506,181	-		GFF4564	0.30	+0.4
1,506,348	+		GFF4564	0.51	-0.5
1,506,348	+		GFF4564	0.51	-0.8
1,506,348	+		GFF4564	0.51	-0.3
1,506,349	-		GFF4564	0.51	+1.1
1,506,349	-		GFF4564	0.51	+0.9
1,506,349	-		GFF4564	0.51	-1.0
1,506,429	+		GFF4564	0.60	+0.1
1,506,612	+		GFF4564	0.83	+0.3
1,506,612	+		GFF4564	0.83	+0.3
1,506,612	+		GFF4564	0.83	-0.1
1,506,612	+		GFF4564	0.83	-0.5
1,506,612	+		GFF4564	0.83	-0.3
1,506,613	-		GFF4564	0.83	+0.5
1,506,675	+				-0.1
1,506,675	+				+0.0
1,506,676	-				-1.6
1,506,676	-				+0.1
1,506,741	+				+0.4
1,506,741	+				+0.1
1,506,741	+				+0.0
1,506,742	-				-0.2