Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4034

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
950,273	+		GFF4033	0.79	+0.8
950,273	+		GFF4033	0.79	-0.6
950,274	-		GFF4033	0.79	+0.5
950,888	+				+0.3
950,888	+				+1.3
950,889	-				-0.1
950,889	-				+0.6
951,057	+				+0.0
951,058	-				+0.1
951,058	-				-0.3
951,085	-				-1.6
951,085	-				-0.3
951,085	-				-1.4
951,122	+				-0.7
951,225	+				+0.4
951,225	+				+0.7
951,225	+				-0.6
951,225	+				-0.1
951,542	+		GFF4034	0.34	+0.0
951,543	-		GFF4034	0.34	+0.1
951,914	+		GFF4034	0.75	+1.3
951,914	+		GFF4034	0.75	+0.4
952,371	+		GFF4035	0.22	+0.4
952,519	+		GFF4035	0.34	+0.3
952,520	-		GFF4035	0.34	-1.3
952,520	-		GFF4035	0.34	-0.6
952,520	-		GFF4035	0.34	-0.6
952,535	-		GFF4035	0.35	-0.3