Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3932

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
845,420	+				+0.5
845,420	+				+0.2
845,420	+				+0.2
845,420	+				-0.7
845,420	+				-0.1
845,421	-				+0.2
845,421	-				-0.2
845,434	+				+0.5
845,435	-				-0.3
845,604	+				-0.2
845,604	+				+0.2
845,604	+				+0.3
845,604	+				-0.9
845,605	-				+0.1
845,605	-				+0.1
845,605	-				-0.3
845,605	-				+0.1
845,605	-				-0.3
845,605	-				-0.2
846,313	+				+1.2
846,313	+				+0.0
846,388	+		GFF3933	0.15	-1.9
846,389	-		GFF3933	0.15	-0.6
846,389	-		GFF3933	0.15	-0.9
846,389	-		GFF3933	0.15	-1.4
846,665	-		GFF3933	0.88	-1.2
846,665	-		GFF3933	0.88	-1.2
846,665	-		GFF3933	0.88	-1.1
846,783	+				+0.4
846,784	-				-0.8
846,784	-				-0.3
846,785	+				-0.9
846,785	+				+0.1
846,785	+				+0.2
846,786	-				-0.5
846,891	+				-1.8
846,891	+				-4.2
847,050	+		GFF3934	0.16	-0.3
847,050	+		GFF3934	0.16	+0.2
847,143	+		GFF3934	0.24	-1.2
847,143	+		GFF3934	0.24	-0.9
847,143	+		GFF3934	0.24	+0.4
847,144	-		GFF3934	0.24	+0.6
847,144	-		GFF3934	0.24	-0.9