Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF38

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
36,782	+		GFF37	0.82	-0.0
36,782	+		GFF37	0.82	+0.0
36,923	+		GFF37	0.87	+0.8
36,924	-		GFF37	0.87	+0.1
37,882	+		GFF38	0.20	-1.2
37,883	-		GFF38	0.20	+0.2
37,883	-		GFF38	0.20	+0.4
38,315	-		GFF38	0.39	-0.3
38,392	+		GFF38	0.42	+0.7
38,552	-		GFF38	0.49	+0.0
38,644	+		GFF38	0.53	-1.0
38,645	-		GFF38	0.53	-1.2
39,074	-		GFF38	0.71	-0.2
39,268	+		GFF38	0.80	+0.4
39,269	-		GFF38	0.80	-1.0
39,508	+				-1.0
39,509	-				-1.3
39,905	-		GFF39	0.17	-0.4
40,084	+		GFF39	0.41	-0.4
40,318	+		GFF39	0.71	-0.5
40,319	-		GFF39	0.71	-0.4
40,319	-		GFF39	0.71	+0.4